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This page was generated on 2022-03-17 11:08:50 -0400 (Thu, 17 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4060
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for segmenter on riesling1


To the developers/maintainers of the segmenter package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/segmenter.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1762/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmenter 1.1.0  (landing page)
Mahmoud Ahmed
Snapshot Date: 2022-03-16 13:55:23 -0400 (Wed, 16 Mar 2022)
git_url: https://git.bioconductor.org/packages/segmenter
git_branch: master
git_last_commit: 2d0a73d
git_last_commit_date: 2021-10-26 13:10:57 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: segmenter
Version: 1.1.0
Command: rm -rf segmenter.buildbin-libdir && mkdir segmenter.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=segmenter.buildbin-libdir segmenter_1.1.0.tar.gz
StartedAt: 2022-03-16 21:28:11 -0400 (Wed, 16 Mar 2022)
EndedAt: 2022-03-16 21:30:06 -0400 (Wed, 16 Mar 2022)
EllapsedTime: 114.7 seconds
RetCode: 0
Status:   OK  
PackageFile: segmenter_1.1.0.zip
PackageFileSize: 4.317 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf segmenter.buildbin-libdir && mkdir segmenter.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=segmenter.buildbin-libdir segmenter_1.1.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'segmenter' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'segmenter'
    finding HTML links ... done
    accessors                               html  
    annotate_segments                       html  
    binarize_bam                            html  
    binarize_bed                            html  
    compare_models                          html  
    count_reads_ranges                      html  
    dot-Binarize                            html  
    dot-LearnModel                          html  
    emissions_file                          html  
    enrichment_files                        html  
    get_frequency                           html  
    get_width                               html  
    learn_model                             html  
    merge_segments_bins                     html  
    methods                                 html  
    model_file                              html  
    overlap_files                           html  
    plot_heatmap                            html  
    range_bins                              html  
    range_counts                            html  
    read_bam_file                           html  
    read_bins_file                          html  
    read_cellmark_file                      html  
    read_chromsize_file                     html  
    read_emissions_file                     html  
    read_enrichment_file                    html  
    read_model_file                         html  
    read_overlap_file                       html  
    read_segements_file                     html  
    read_transitions_file                   html  
    segmentation                            html  
    segments_files                          html  
    test_obj                                html  
    test_objs                               html  
    tidy_ranges                             html  
    transitions_file                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'segmenter' as segmenter_1.1.0.zip
* DONE (segmenter)