Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-11-05 12:08 -0500 (Tue, 05 Nov 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4503 |
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4506 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4539 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 297/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
CellBarcode 1.12.0 (landing page) Wenjie Sun
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the CellBarcode package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CellBarcode.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: CellBarcode |
Version: 1.12.0 |
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:CellBarcode.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings CellBarcode_1.12.0.tar.gz |
StartedAt: 2024-11-05 06:16:14 -0000 (Tue, 05 Nov 2024) |
EndedAt: 2024-11-05 06:21:38 -0000 (Tue, 05 Nov 2024) |
EllapsedTime: 324.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: CellBarcode.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD check --install=check:CellBarcode.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings CellBarcode_1.12.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/CellBarcode.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: aarch64-unknown-linux-gnu * R was compiled by gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14) GNU Fortran (GCC) 10.3.1 * running under: openEuler 22.03 (LTS-SP1) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘CellBarcode/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘CellBarcode’ version ‘1.12.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘CellBarcode’ can be installed ... OK * used C++ compiler: ‘g++ (conda-forge gcc 14.2.0-1) 14.2.0’ * checking installed package size ... NOTE installed size is 7.9Mb sub-directories of 1Mb or more: extdata 1.5Mb libs 5.7Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE bc_extract_sc_fastq: no visible binding for global variable ‘cell_barcode’ bc_extract_sc_fastq: no visible binding for global variable ‘umi’ bc_extract_sc_fastq: no visible binding for global variable ‘barcode_seq’ process_sc_list: no visible binding for global variable ‘cell_barcode’ process_sc_list: no visible binding for global variable ‘umi’ process_sc_list: no visible binding for global variable ‘barcode_seq’ bc_2matrix,BarcodeObj: no visible binding for global variable ‘barcode_seq’ bc_cure_depth,BarcodeObj : <anonymous>: no visible binding for global variable ‘barcode_seq’ bc_cure_umi,BarcodeObj : <anonymous>: no visible binding for global variable ‘barcode_seq’ bc_cure_umi,BarcodeObj : <anonymous>: no visible binding for global variable ‘umi_seq’ bc_extract,data.frame: no visible binding for global variable ‘umi_seq’ bc_extract,data.frame: no visible binding for global variable ‘barcode_seq’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘barcode_read_count’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘raw_read_count’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘umi_seq’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘barcode_seq’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘cell_barcode’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘V1’ bc_plot_count,BarcodeObj: no visible binding for global variable ‘x’ bc_plot_seqQc,BarcodeQcSet: no visible binding for global variable ‘sample_name’ bc_subset,BarcodeObj : <anonymous>: no visible binding for global variable ‘barcode_seq’ Undefined global functions or variables: V1 barcode_read_count barcode_seq cell_barcode raw_read_count sample_name umi umi_seq x * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... NOTE Found the following Makefile(s) without a final LF: src/Makevars Some ‘make’ programs ignore lines not ending in LF. * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 4 NOTEs See ‘/home/biocbuild/bbs-3.20-bioc/meat/CellBarcode.Rcheck/00check.log’ for details.
CellBarcode.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL CellBarcode ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’ * installing *source* package ‘CellBarcode’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (conda-forge gcc 14.2.0-1) 14.2.0’ g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lib_10X_barcode.cpp -o lib_10X_barcode.o In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/arg.hpp:25, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/placeholders.hpp:24, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:13, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/iterator_range_core.hpp:27, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/iterator_range.hpp:13, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/as_literal.hpp:18, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/trim.hpp:19, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string.hpp:19, from lib_10X_barcode.cpp:10: /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses] 199 | failed ************ (boost::mpl::not_<Pred>::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_<Pred>::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/mem_fn.hpp:22, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/function.hpp:30, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:16, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string.hpp:23: /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p) | ^~~~~~~~ In file included from /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/memory:78, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/function/function_base.hpp:34, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/function/detail/prologue.hpp:18: /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/unique_ptr.h:59:28: note: declared here 59 | template<typename> class auto_ptr; | ^~~~~~~~ lib_10X_barcode.cpp: In function 'Rcpp::List parse_10x_sam(std::string, std::string, std::string, std::string)': lib_10X_barcode.cpp:84:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 84 | for (int j=11; j<parts.size(); j++) { | ~^~~~~~~~~~~~~ In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/assert.hpp:35, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:20, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:19, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/size_type.hpp:20, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/size.hpp:21, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/functions.hpp:20, from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/iterator_range_core.hpp:38: /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::constraint<Model>::failed() [with Model = boost::algorithm::FinderConcept<boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >, char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: 'this' pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26: /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function 'void boost::algorithm::FinderConcept<FinderT, IteratorT>::constraints() [with FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >; IteratorT = char*]' 40 | void constraints() | ^~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:167:5: required from 'struct boost::CopyConstructible<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:125:16: required from 'struct boost::range_detail::IncrementableIteratorConcept<char*>' 125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:31: /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<char*>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from 'struct boost::range_detail::IncrementableIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:136:13: required from 'struct boost::range_detail::IncrementableIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<char*>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:233:5: required from 'struct boost::EqualityComparable<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<char*>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:152:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<char*>)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:158:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<char*>)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:278:9: required from 'struct boost::SinglePassRangeConcept<const boost::iterator_range<char*> >' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<char*> >)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = char*]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:284:9: required from 'struct boost::SinglePassRangeConcept<const boost::iterator_range<char*> >' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from 'struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<char*> >)>' 72 | struct requirement_<void(*)(Model)> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]' 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from 'bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<char*>; SinglePassRange2 = boost::iterator_range<char*>]' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from 'bool boost::operator==(const iterator_range<IteratorT>&, const iterator_range<Iterator2T>&) [with Iterator1T = char*; Iterator2T = char*]' 644 | return boost::equal( l, r ); | ~~~~~~~~~~~~^~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from 'bool boost::algorithm::split_iterator<IteratorT>::equal(const boost::algorithm::split_iterator<IteratorT>&) const [with IteratorT = char*]' 359 | m_Match==Other.m_Match && | ~~~~~~~^~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from 'static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<char*>; Facade2 = boost::algorithm::split_iterator<char*>; mpl_::true_ = mpl_::bool_<true>]' 649 | return f1.equal(f2); | ~~~~~~~~^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator==(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::algorithm::split_iterator<char*>; V1 = const boost::iterator_range<char*>; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range<char*>&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<char*>; V2 = const boost::iterator_range<char*>; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range<char*>&; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: 'this' pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<char*>]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<char*> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:167:5: required from 'struct boost::CopyConstructible<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:125:16: required from 'struct boost::range_detail::IncrementableIteratorConcept<char*>' 125 | struct IncrementableIteratorConcept : CopyConstructible<Iterator> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::CopyConstructible<TT>::~CopyConstructible() [with TT = char*]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<char*> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:136:13: required from 'struct boost::range_detail::IncrementableIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::IncrementableIteratorConcept<Iterator>::~IncrementableIteratorConcept() [with Iterator = char*]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<char*> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:233:5: required from 'struct boost::EqualityComparable<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:147:16: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::EqualityComparable<TT>::~EqualityComparable() [with TT = char*]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: required from 'struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<char*> >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:158:13: required from 'struct boost::range_detail::SinglePassIteratorConcept<char*>' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<char*>]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<char*> >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = char*]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp: In instantiation of 'boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]': /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from 'static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >]' 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:284:9: required from 'struct boost::SinglePassRangeConcept<const boost::iterator_range<char*> >' 92 | &::boost::concepts::requirement_<ModelFnPtr>::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of 'template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<char*> >]' 32 | inline yes has_constraints_(Model*, wrap_constraints<Model,&Model::constraints>* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from 'const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >::value' 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from 'struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<char*> > >' 45 | typedef boost::integral_constant<bool, value> type; | ^~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from 'typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<detail::always_bool2, Derived1, Derived2>::type = bool]' 966 | return_prefix iterator_core_access::base_op( \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 | *static_cast<Derived1 const*>(&lhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 968 | , *static_cast<Derived2 const*>(&rhs) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 | , BOOST_ITERATOR_CONVERTIBLE(Derived2,Derived1) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 970 | ); \ | ~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:1673:21: required from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]' 1673 | for (; __first != __last; ++__first) | ~~~~~~~~^~~~~~~~~ /home/biocbuild/miniforge3/lib/gcc/aarch64-conda-linux-gnu/14.2.0/include/c++/bits/stl_vector.h:711:23: required from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, char*>, boost::algorithm::split_iterator<char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; allocator_type = std::allocator<std::__cxx11::basic_string<char> >]' 711 | _M_range_initialize(__first, __last, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 712 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from 'SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; FinderT = detail::token_finderF<detail::is_any_ofF<char> >]' 186 | SequenceSequenceT Tmp(itBegin, itEnd); | ^~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from 'SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = char (&)[65536]; PredicateT = detail::is_any_ofF<char>]' 158 | return ::boost::algorithm::iter_split( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 159 | Result, | ~~~~~~~ 160 | Input, | ~~~~~~ 161 | ::boost::algorithm::token_finder( Pred, eCompress ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib_10X_barcode.cpp:81:18: required from here 81 | split(parts, line, boost::is_any_of("\t")); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: 'this' pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function 'boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<char*>]' 37 | ~model() | ^ /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro 'BOOST_CONCEPT_USAGE' 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lib_clustering.cpp -o lib_clustering.o lib_clustering.cpp: In function 'int hamm_dist(std::string, std::string)': lib_clustering.cpp:59:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare] 59 | for (int i=0; i < s1.length(); i++) { | ~~^~~~~~~~~~~~~ lib_clustering.cpp: In function 'Rcpp::List seq_correct(std::vector<std::__cxx11::basic_string<char> >, Rcpp::IntegerVector, int, int, double, int, int, int, int)': lib_clustering.cpp:127:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 127 | for (auto i=0; i<seq.size(); i++) { | ~^~~~~~~~~~~ lib_clustering.cpp:232:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 232 | for (auto i=0; i<res.size(); i++) { | ~^~~~~~~~~~~ g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c lib_read_seq.cpp -o lib_read_seq.o g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.4.1/lib -L/usr/local/lib -o CellBarcode.so RcppExports.o lib_10X_barcode.o lib_clustering.o lib_read_seq.o -L/home/biocbuild/R/R-4.4.1/lib -lR installing to /home/biocbuild/R/R-4.4.1/site-library/00LOCK-CellBarcode/00new/CellBarcode/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CellBarcode)
CellBarcode.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(CellBarcode) > > test_check("CellBarcode") ------------ bc_cure_depth: isUpdate is FALSE, use messyBc as input. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is FALSE, use messyBc as input. ------------ Loading required package: BiocGenerics Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, saveRDS, setdiff, table, tapply, union, unique, unsplit, which.max, which.min Loading required package: BiocParallel Loading required package: Biostrings Loading required package: S4Vectors Loading required package: stats4 Attaching package: 'S4Vectors' The following object is masked from 'package:utils': findMatches The following objects are masked from 'package:base': I, expand.grid, unname Loading required package: IRanges Loading required package: XVector Loading required package: GenomeInfoDb Attaching package: 'Biostrings' The following object is masked from 'package:base': strsplit Loading required package: Rsamtools Loading required package: GenomicRanges Loading required package: GenomicAlignments Loading required package: SummarizedExperiment Loading required package: MatrixGenerics Loading required package: matrixStats Attaching package: 'MatrixGenerics' The following objects are masked from 'package:matrixStats': colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, colCounts, colCummaxs, colCummins, colCumprods, colCumsums, colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, colWeightedMeans, colWeightedMedians, colWeightedSds, colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, rowWeightedMads, rowWeightedMeans, rowWeightedMedians, rowWeightedSds, rowWeightedVars Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. Attaching package: 'Biobase' The following object is masked from 'package:MatrixGenerics': rowMedians The following objects are masked from 'package:matrixStats': anyMissing, rowMedians ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ ------------ bc_cure_depth: isUpdate is TRUE, update the cleanBc. ------------ [ FAIL 0 | WARN 0 | SKIP 3 | PASS 37 ] ══ Skipped tests (3) ═══════════════════════════════════════════════════════════ • On CRAN (3): 'test-BarcodeObj.R:119:3', 'test-describ.R:51:3', 'test-qc.R:17:3' [ FAIL 0 | WARN 0 | SKIP 3 | PASS 37 ] > > proc.time() user system elapsed 15.577 0.536 16.036
CellBarcode.Rcheck/CellBarcode-Ex.timings
name | user | system | elapsed | |
BarcodeObj | 0.523 | 0.008 | 0.532 | |
bc_2df | 0.020 | 0.000 | 0.019 | |
bc_auto_cutoff | 0.003 | 0.000 | 0.003 | |
bc_barcodes | 0.001 | 0.000 | 0.001 | |
bc_cleanBc | 0.007 | 0.000 | 0.007 | |
bc_create_BarcodeObj | 0.009 | 0.003 | 0.012 | |
bc_cure_cluster | 0.062 | 0.000 | 0.062 | |
bc_cure_depth | 0.029 | 0.000 | 0.028 | |
bc_cure_umi | 0.018 | 0.000 | 0.017 | |
bc_extract | 0.426 | 0.000 | 0.426 | |
bc_extract_sc_sam | 0.122 | 0.000 | 0.123 | |
bc_messyBc | 0.006 | 0.000 | 0.006 | |
bc_meta | 0.004 | 0.000 | 0.004 | |
bc_names | 0.001 | 0.000 | 0.001 | |
bc_plot_count | 0.787 | 0.004 | 0.793 | |
bc_plot_mutual | 1.269 | 0.036 | 1.307 | |
bc_plot_pair | 0.266 | 0.000 | 0.266 | |
bc_plot_single | 0.559 | 0.004 | 0.563 | |
bc_seq_filter | 0.435 | 0.028 | 0.464 | |
bc_seq_qc | 2.613 | 0.036 | 2.653 | |
bc_splitVDJ | 1.144 | 0.028 | 1.174 | |
bc_subset | 0.130 | 0.008 | 0.137 | |
bc_summary_barcode | 0.523 | 0.020 | 0.543 | |
bc_summary_seqQc | 4.902 | 0.028 | 4.953 | |
format | 0.004 | 0.000 | 0.004 | |
show | 0.000 | 0.004 | 0.004 | |
subset | 3.922 | 0.024 | 3.954 | |