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This page was generated on 2024-07-03 11:42 -0400 (Wed, 03 Jul 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" 4693
palomino6Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4413
lconwaymacOS 12.7.1 Montereyx86_644.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" 4407
kjohnson3macOS 13.6.5 Venturaarm644.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" 4356
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 (2024-04-24) -- "Puppy Cup" 4407
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1177/2243HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MetaboAnnotation 1.9.1  (landing page)
Johannes Rainer
Snapshot Date: 2024-07-02 14:00 -0400 (Tue, 02 Jul 2024)
git_url: https://git.bioconductor.org/packages/MetaboAnnotation
git_branch: devel
git_last_commit: b96137d
git_last_commit_date: 2024-05-16 03:13:56 -0400 (Thu, 16 May 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino6Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  

BUILD results for MetaboAnnotation on lconway

To the developers/maintainers of the MetaboAnnotation package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MetaboAnnotation.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MetaboAnnotation
Version: 1.9.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MetaboAnnotation
StartedAt: 2024-07-02 17:08:51 -0400 (Tue, 02 Jul 2024)
EndedAt: 2024-07-02 17:10:23 -0400 (Tue, 02 Jul 2024)
EllapsedTime: 92.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MetaboAnnotation
###
##############################################################################
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* checking for file ‘MetaboAnnotation/DESCRIPTION’ ... OK
* preparing ‘MetaboAnnotation’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MetaboAnnotation.Rmd’ using rmarkdown
2024-07-02 17:10:13.395 R[31676:247371451] XType: com.apple.fonts is not accessible.
2024-07-02 17:10:13.395 R[31676:247371451] XType: XTFontStaticRegistry is enabled.

Quitting from lines 652-654 [unnamed-chunk-38] (MetaboAnnotation.Rmd)
Error: processing vignette 'MetaboAnnotation.Rmd' failed with diagnostics:
no such table: ms_compound
--- failed re-building ‘MetaboAnnotation.Rmd’

SUMMARY: processing the following file failed:
  ‘MetaboAnnotation.Rmd’

Error: Vignette re-building failed.
Execution halted