Back to Multiple platform build/check report for BioC 3.20:   simplified   long
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-08-27 11:46 -0400 (Tue, 27 Aug 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4703
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4440
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4472
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4421
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4415
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 137/2255HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basilisk 1.17.2  (landing page)
Aaron Lun
Snapshot Date: 2024-08-26 14:00 -0400 (Mon, 26 Aug 2024)
git_url: https://git.bioconductor.org/packages/basilisk
git_branch: devel
git_last_commit: 0a851fa
git_last_commit_date: 2024-07-27 03:21:29 -0400 (Sat, 27 Jul 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  

CHECK results for basilisk on kunpeng2

To the developers/maintainers of the basilisk package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/basilisk.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: basilisk
Version: 1.17.2
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:basilisk.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings basilisk_1.17.2.tar.gz
StartedAt: 2024-08-27 02:39:04 -0000 (Tue, 27 Aug 2024)
EndedAt: 2024-08-27 03:00:07 -0000 (Tue, 27 Aug 2024)
EllapsedTime: 1263.5 seconds
RetCode: 0
Status:   OK  
CheckDir: basilisk.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD check --install=check:basilisk.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings basilisk_1.17.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)
    GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘basilisk/DESCRIPTION’ ... OK
* this is package ‘basilisk’ version ‘1.17.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  inst/example/.BBSoptions
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘basilisk’ can be installed ... NOTE
Found the following notes/warnings:
  Non-staged installation was used
See ‘/home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/00install.out’ for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
basiliskStart          103.325  6.371 129.197
createLocalBasiliskEnv  50.159  3.052  58.046
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/00check.log’
for details.

Installation output

basilisk.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL basilisk
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’
* installing *source* package ‘basilisk’ ...
** using non-staged installation via StagedInstall field
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (basilisk)

Tests output

basilisk.Rcheck/tests/testthat.Rout


R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(basilisk)
Loading required package: reticulate
> if (.Platform$OS.type != "windows") test_check("basilisk")
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - pandas=1.4.3
    - python-dateutil=2.8.2
    - python=3.10.14
    - pytz=2022.2.1


The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.3-py310h9e1bc84_0 
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.2-pyhd8ed1ab_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2022.2.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - pandas=1.4.2
    - python-dateutil=2.8.1
    - python=3.10.14
    - pytz=2022.1


The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.2-py310h9e1bc84_2 
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.1-py_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2022.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python-dateutil=2.8.1
    - python=3.10.14
    - pytz=2022.1


The following NEW packages will be INSTALLED:

  python-dateutil    conda-forge/noarch::python-dateutil-2.8.1-py_0 
  pytz               conda-forge/noarch::pytz-2022.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting pandas==1.4.2
  Using cached pandas-1.4.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl.metadata (12 kB)
Requirement already satisfied: python-dateutil>=2.8.1 in ./install-test-client/thingo/lib/python3.10/site-packages (from pandas==1.4.2) (2.8.1)
Requirement already satisfied: pytz>=2020.1 in ./install-test-client/thingo/lib/python3.10/site-packages (from pandas==1.4.2) (2022.1)
Collecting numpy>=1.21.0 (from pandas==1.4.2)
  Using cached numpy-2.1.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl.metadata (62 kB)
Requirement already satisfied: six>=1.5 in ./install-test-client/thingo/lib/python3.10/site-packages (from python-dateutil>=2.8.1->pandas==1.4.2) (1.16.0)
Using cached pandas-1.4.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (11.0 MB)
Using cached numpy-2.1.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (14.0 MB)
Installing collected packages: numpy, pandas
Successfully installed numpy-2.1.0 pandas-1.4.2
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Processing /home/biocbuild/R/R-4.4.1/site-library/basilisk/example/inst/test_dummy
  Preparing metadata (setup.py): started
  Preparing metadata (setup.py): finished with status 'done'
Building wheels for collected packages: test_dummy
  Building wheel for test_dummy (setup.py): started
  Building wheel for test_dummy (setup.py): finished with status 'done'
  Created wheel for test_dummy: filename=test_dummy-0.1-py3-none-any.whl size=1280 sha256=4c3191142d41c15051c0dfefe17cd611b6a95aea6f174707d25460ae7a8ae8a3
  Stored in directory: /home/biocbuild/tmp/pip-ephem-wheel-cache-vtygw7hq/wheels/e0/65/22/4610625485355ae6a233ece910e6e0fc36a8d8549bf984c3fe
Successfully built test_dummy
Installing collected packages: test_dummy
Successfully installed test_dummy-0.1
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/thingo

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

PackagesNotFoundError: The following packages are not available from current channels:

  - whheeeeeeeeeeeeeeeeee=0.0.1*

Current channels:

  - https://conda.anaconda.org/conda-forge

To search for alternate channels that may provide the conda package you're
looking for, navigate to

    https://anaconda.org

and use the search bar at the top of the page.


trying URL 'https://github.com/conda-forge/miniforge/releases/download/24.3.0-0/Miniforge3-24.3.0-0-Linux-aarch64.sh'
Content type 'application/octet-stream' length 74300552 bytes (70.9 MB)
==================================================
downloaded 70.9 MB

PREFIX=/home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/0
Unpacking payload ...
Extracting ca-certificates-2024.2.2-hcefe29a_0.conda
Extracting ld_impl_linux-aarch64-2.40-h2d8c526_0.conda
Extracting libgomp-13.2.0-hf8544c7_5.conda
Extracting libstdcxx-ng-13.2.0-h9a76618_5.conda
Extracting pybind11-abi-4-hd8ed1ab_3.tar.bz2
Extracting python_abi-3.10-4_cp310.conda
Extracting tzdata-2024a-h0c530f3_0.conda
Extracting _openmp_mutex-4.5-2_gnu.tar.bz2
Extracting libgcc-ng-13.2.0-hf8544c7_5.conda
Extracting bzip2-1.0.8-h31becfc_5.conda
Extracting c-ares-1.28.1-h31becfc_0.conda
Extracting fmt-10.2.1-h2a328a1_0.conda
Extracting icu-73.2-h787c7f5_0.conda
Extracting keyutils-1.6.1-h4e544f5_0.tar.bz2
Extracting libev-4.33-h31becfc_2.conda
Extracting libffi-3.4.2-h3557bc0_5.tar.bz2
Extracting libiconv-1.17-h31becfc_2.conda
Extracting libnsl-2.0.1-h31becfc_0.conda
Extracting libuuid-2.38.1-hb4cce97_0.conda
Extracting libxcrypt-4.4.36-h31becfc_1.conda
Extracting libzlib-1.2.13-h31becfc_5.conda
Extracting lz4-c-1.9.4-hd600fc2_0.conda
Extracting lzo-2.10-h516909a_1000.tar.bz2
Extracting ncurses-6.4.20240210-h0425590_0.conda
Extracting openssl-3.2.1-h31becfc_1.conda
Extracting reproc-14.2.4.post0-h31becfc_1.conda
Extracting xz-5.2.6-h9cdd2b7_0.tar.bz2
Extracting yaml-cpp-0.8.0-h2f0025b_0.conda
Extracting libedit-3.1.20191231-he28a2e2_2.tar.bz2
Extracting libnghttp2-1.58.0-hb0e430d_1.conda
Extracting libsolv-0.7.28-hd84c7bf_2.conda
Extracting libsqlite-3.45.2-h194ca79_0.conda
Extracting libssh2-1.11.0-h492db2e_0.conda
Extracting libxml2-2.12.6-h3091e33_1.conda
Extracting readline-8.2-h8fc344f_1.conda
Extracting reproc-cpp-14.2.4.post0-h2f0025b_1.conda
Extracting tk-8.6.13-h194ca79_0.conda
Extracting zstd-1.5.5-h4c53e97_0.conda
Extracting krb5-1.21.2-hc419048_0.conda
Extracting libarchive-3.7.2-hd2f85e0_1.conda
Extracting python-3.10.14-hbbe8eec_0_cpython.conda
Extracting libcurl-8.7.1-h4e8248e_0.conda
Extracting menuinst-2.0.2-py310h4c7bcd0_0.conda
Extracting archspec-0.2.3-pyhd8ed1ab_0.conda
Extracting boltons-24.0.0-pyhd8ed1ab_0.conda
Extracting brotli-python-1.1.0-py310hbb3657e_1.conda
Extracting certifi-2024.2.2-pyhd8ed1ab_0.conda
Extracting charset-normalizer-3.3.2-pyhd8ed1ab_0.conda
Extracting colorama-0.4.6-pyhd8ed1ab_0.tar.bz2
Extracting distro-1.9.0-pyhd8ed1ab_0.conda
Extracting idna-3.7-pyhd8ed1ab_0.conda
Extracting jsonpointer-2.4-py310h4c7bcd0_3.conda
Extracting libmamba-1.5.8-hea3be6c_0.conda
Extracting packaging-24.0-pyhd8ed1ab_0.conda
Extracting platformdirs-4.2.0-pyhd8ed1ab_0.conda
Extracting pluggy-1.4.0-pyhd8ed1ab_0.conda
Extracting pycosat-0.6.6-py310hb299538_0.conda
Extracting pycparser-2.22-pyhd8ed1ab_0.conda
Extracting pysocks-1.7.1-pyha2e5f31_6.tar.bz2
Extracting ruamel.yaml.clib-0.2.8-py310hb299538_0.conda
Extracting setuptools-69.5.1-pyhd8ed1ab_0.conda
Extracting truststore-0.8.0-pyhd8ed1ab_0.conda
Extracting wheel-0.43.0-pyhd8ed1ab_1.conda
Extracting cffi-1.16.0-py310hce94938_0.conda
Extracting jsonpatch-1.33-pyhd8ed1ab_0.conda
Extracting libmambapy-1.5.8-py310h5938bc3_0.conda
Extracting pip-24.0-pyhd8ed1ab_0.conda
Extracting ruamel.yaml-0.18.6-py310hb299538_0.conda
Extracting tqdm-4.66.2-pyhd8ed1ab_0.conda
Extracting urllib3-2.2.1-pyhd8ed1ab_0.conda
Extracting requests-2.31.0-pyhd8ed1ab_0.conda
Extracting zstandard-0.22.0-py310h468e293_0.conda
Extracting conda-package-streaming-0.9.0-pyhd8ed1ab_0.conda
Extracting conda-package-handling-2.2.0-pyh38be061_0.conda
Extracting conda-24.3.0-py310h4c7bcd0_0.conda
Extracting conda-libmamba-solver-24.1.0-pyhd8ed1ab_0.conda
Extracting mamba-1.5.8-py310hcbdc16a_0.conda

Installing base environment...

Transaction

  Prefix: /home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/0

  Updating specs:

   - conda-forge/linux-aarch64::ca-certificates==2024.2.2=hcefe29a_0[md5=57c226edb90c4e973b9b7503537dd339]
   - conda-forge/linux-aarch64::ld_impl_linux-aarch64==2.40=h2d8c526_0[md5=16246d69e945d0b1969a6099e7c5d457]
   - conda-forge/linux-aarch64::libgomp==13.2.0=hf8544c7_5[md5=379be2f115ffb73860e4e260dd2170b7]
   - conda-forge/linux-aarch64::libstdcxx-ng==13.2.0=h9a76618_5[md5=1b79d37dce0fad96bdf3de03925f43b4]
   - conda-forge/noarch::pybind11-abi==4=hd8ed1ab_3[md5=878f923dd6acc8aeb47a75da6c4098be]
   - conda-forge/linux-aarch64::python_abi==3.10=4_cp310[md5=b0ff2ed109650f9e90d627d3119eb442]
   - conda-forge/noarch::tzdata==2024a=h0c530f3_0[md5=161081fc7cec0bfda0d86d7cb595f8d8]
   - conda-forge/linux-aarch64::_openmp_mutex==4.5=2_gnu[md5=6168d71addc746e8f2b8d57dfd2edcea]
   - conda-forge/linux-aarch64::libgcc-ng==13.2.0=hf8544c7_5[md5=dee934e640275d9e74e7bbd455f25162]
   - conda-forge/linux-aarch64::bzip2==1.0.8=h31becfc_5[md5=a64e35f01e0b7a2a152eca87d33b9c87]
   - conda-forge/linux-aarch64::c-ares==1.28.1=h31becfc_0[md5=a8da75795c853c5fe6d8d1947e16eea8]
   - conda-forge/linux-aarch64::fmt==10.2.1=h2a328a1_0[md5=540b6320d3c929e012fae0d08f43224d]
   - conda-forge/linux-aarch64::icu==73.2=h787c7f5_0[md5=9d3c29d71f28452a2e843aff8cbe09d2]
   - conda-forge/linux-aarch64::keyutils==1.6.1=h4e544f5_0[md5=1f24853e59c68892452ef94ddd8afd4b]
   - conda-forge/linux-aarch64::libev==4.33=h31becfc_2[md5=a9a13cb143bbaa477b1ebaefbe47a302]
   - conda-forge/linux-aarch64::libffi==3.4.2=h3557bc0_5[md5=dddd85f4d52121fab0a8b099c5e06501]
   - conda-forge/linux-aarch64::libiconv==1.17=h31becfc_2[md5=9a8eb13f14de7d761555a98712e6df65]
   - conda-forge/linux-aarch64::libnsl==2.0.1=h31becfc_0[md5=c14f32510f694e3185704d89967ec422]
   - conda-forge/linux-aarch64::libuuid==2.38.1=hb4cce97_0[md5=000e30b09db0b7c775b21695dff30969]
   - conda-forge/linux-aarch64::libxcrypt==4.4.36=h31becfc_1[md5=b4df5d7d4b63579d081fd3a4cf99740e]
   - conda-forge/linux-aarch64::libzlib==1.2.13=h31becfc_5[md5=b213aa87eea9491ef7b129179322e955]
   - conda-forge/linux-aarch64::lz4-c==1.9.4=hd600fc2_0[md5=500145a83ed07ce79c8cef24252f366b]
   - conda-forge/linux-aarch64::lzo==2.10=h516909a_1000[md5=ef5661339990c399c68c71cfb341e6d7]
   - conda-forge/linux-aarch64::ncurses==6.4.20240210=h0425590_0[md5=c1a1612ddaee95c83abfa0b2ec858626]
   - conda-forge/linux-aarch64::openssl==3.2.1=h31becfc_1[md5=e95eb18d256edc72058e0dc9be5338a0]
   - conda-forge/linux-aarch64::reproc==14.2.4.post0=h31becfc_1[md5=c148bb4ba029a018527d3e4d5c7b63fa]
   - conda-forge/linux-aarch64::xz==5.2.6=h9cdd2b7_0[md5=83baad393a31d59c20b63ba4da6592df]
   - conda-forge/linux-aarch64::yaml-cpp==0.8.0=h2f0025b_0[md5=b5da38ee183c1e50e3e7ffb171a2eca5]
   - conda-forge/linux-aarch64::libedit==3.1.20191231=he28a2e2_2[md5=29371161d77933a54fccf1bb66b96529]
   - conda-forge/linux-aarch64::libnghttp2==1.58.0=hb0e430d_1[md5=8f724cdddffa79152de61f5564a3526b]
   - conda-forge/linux-aarch64::libsolv==0.7.28=hd84c7bf_2[md5=29fd3cfa159253787d7d49ce8fe1c515]
   - conda-forge/linux-aarch64::libsqlite==3.45.2=h194ca79_0[md5=bf4c96a21fbfc6a6ef6a7781a534a4e0]
   - conda-forge/linux-aarch64::libssh2==1.11.0=h492db2e_0[md5=45532845e121677ad328c9af9953f161]
   - conda-forge/linux-aarch64::libxml2==2.12.6=h3091e33_1[md5=d39c279ae11d5574ec893dd3c173328e]
   - conda-forge/linux-aarch64::readline==8.2=h8fc344f_1[md5=105eb1e16bf83bfb2eb380a48032b655]
   - conda-forge/linux-aarch64::reproc-cpp==14.2.4.post0=h2f0025b_1[md5=35148ef0f190022ca52cf6edd6bdc814]
   - conda-forge/linux-aarch64::tk==8.6.13=h194ca79_0[md5=f75105e0585851f818e0009dd1dde4dc]
   - conda-forge/linux-aarch64::zstd==1.5.5=h4c53e97_0[md5=b74eb9dbb5c3c15cb3cee7cbdf198c75]
   - conda-forge/linux-aarch64::krb5==1.21.2=hc419048_0[md5=55b51af37bf6fdcfe06f140e62e8c8db]
   - conda-forge/linux-aarch64::libarchive==3.7.2=hd2f85e0_1[md5=a0f2e7adbcdf4041d6ee273d07ca171e]
   - conda-forge/linux-aarch64::python==3.10.14=hbbe8eec_0_cpython[md5=8a8ee3a8c62032c554debc785a3b5aba]
   - conda-forge/linux-aarch64::libcurl==8.7.1=h4e8248e_0[md5=4e38af63e8603414534bbebdd9885021]
   - conda-forge/linux-aarch64::menuinst==2.0.2=py310h4c7bcd0_0[md5=92dae383fbfc4b7009ceb2f8af4a7565]
   - conda-forge/noarch::archspec==0.2.3=pyhd8ed1ab_0[md5=192278292e20704f663b9c766909d67b]
   - conda-forge/noarch::boltons==24.0.0=pyhd8ed1ab_0[md5=61de176bd62041f9cd5bd4fcd09eb0ff]
   - conda-forge/linux-aarch64::brotli-python==1.1.0=py310hbb3657e_1[md5=5ed52d1d3c480022fe67ae00d1cab792]
   - conda-forge/noarch::certifi==2024.2.2=pyhd8ed1ab_0[md5=0876280e409658fc6f9e75d035960333]
   - conda-forge/noarch::charset-normalizer==3.3.2=pyhd8ed1ab_0[md5=7f4a9e3fcff3f6356ae99244a014da6a]
   - conda-forge/noarch::colorama==0.4.6=pyhd8ed1ab_0[md5=3faab06a954c2a04039983f2c4a50d99]
   - conda-forge/noarch::distro==1.9.0=pyhd8ed1ab_0[md5=bbdb409974cd6cb30071b1d978302726]
   - conda-forge/noarch::idna==3.7=pyhd8ed1ab_0[md5=c0cc1420498b17414d8617d0b9f506ca]
   - conda-forge/linux-aarch64::jsonpointer==2.4=py310h4c7bcd0_3[md5=c7252b728211fc4539a15e8a933b89be]
   - conda-forge/linux-aarch64::libmamba==1.5.8=hea3be6c_0[md5=5484a1fe43ccb2d299d6eb0b5c10e987]
   - conda-forge/noarch::packaging==24.0=pyhd8ed1ab_0[md5=248f521b64ce055e7feae3105e7abeb8]
   - conda-forge/noarch::platformdirs==4.2.0=pyhd8ed1ab_0[md5=a0bc3eec34b0fab84be6b2da94e98e20]
   - conda-forge/noarch::pluggy==1.4.0=pyhd8ed1ab_0[md5=139e9feb65187e916162917bb2484976]
   - conda-forge/linux-aarch64::pycosat==0.6.6=py310hb299538_0[md5=b34c4d754d505d942c6fb80f5d34a3d0]
   - conda-forge/noarch::pycparser==2.22=pyhd8ed1ab_0[md5=844d9eb3b43095b031874477f7d70088]
   - conda-forge/noarch::pysocks==1.7.1=pyha2e5f31_6[md5=2a7de29fb590ca14b5243c4c812c8025]
   - conda-forge/linux-aarch64::ruamel.yaml.clib==0.2.8=py310hb299538_0[md5=9e5cbedd93166a986927571b869d4e6c]
   - conda-forge/noarch::setuptools==69.5.1=pyhd8ed1ab_0[md5=7462280d81f639363e6e63c81276bd9e]
   - conda-forge/noarch::truststore==0.8.0=pyhd8ed1ab_0[md5=08316d001eca8854392cf2837828ea11]
   - conda-forge/noarch::wheel==0.43.0=pyhd8ed1ab_1[md5=0b5293a157c2b5cd513dd1b03d8d3aae]
   - conda-forge/linux-aarch64::cffi==1.16.0=py310hce94938_0[md5=69f5188c0b23d70d99e1f4153fe498cd]
   - conda-forge/noarch::jsonpatch==1.33=pyhd8ed1ab_0[md5=bfdb7c5c6ad1077c82a69a8642c87aff]
   - conda-forge/linux-aarch64::libmambapy==1.5.8=py310h5938bc3_0[md5=b4be2a81b8d23cd110ccfa164f0e6755]
   - conda-forge/noarch::pip==24.0=pyhd8ed1ab_0[md5=f586ac1e56c8638b64f9c8122a7b8a67]
   - conda-forge/linux-aarch64::ruamel.yaml==0.18.6=py310hb299538_0[md5=6112045712a11a44624c7c18e8f9ce65]
   - conda-forge/noarch::tqdm==4.66.2=pyhd8ed1ab_0[md5=2b8dfb969f984497f3f98409a9545776]
   - conda-forge/noarch::urllib3==2.2.1=pyhd8ed1ab_0[md5=08807a87fa7af10754d46f63b368e016]
   - conda-forge/noarch::requests==2.31.0=pyhd8ed1ab_0[md5=a30144e4156cdbb236f99ebb49828f8b]
   - conda-forge/linux-aarch64::zstandard==0.22.0=py310h468e293_0[md5=1823d9c30b74c7d81e263f3ad310b62d]
   - conda-forge/noarch::conda-package-streaming==0.9.0=pyhd8ed1ab_0[md5=38253361efb303deead3eab39ae9269b]
   - conda-forge/noarch::conda-package-handling==2.2.0=pyh38be061_0[md5=8a3ae7f6318376aa08ea753367bb7dd6]
   - conda-forge/linux-aarch64::conda==24.3.0=py310h4c7bcd0_0[md5=08b1ff3f1418723b4ae1e7f7c72e07a5]
   - conda-forge/noarch::conda-libmamba-solver==24.1.0=pyhd8ed1ab_0[md5=304dc78ad6e52e0fd663df1d484c1531]
   - conda-forge/linux-aarch64::mamba==1.5.8=py310hcbdc16a_0[md5=6f4fe2269435e9093a9d045c5d3da613]


  Package                         Version  Build               Channel         Size
─────────────────────────────────────────────────────────────────────────────────────
  Install:
─────────────────────────────────────────────────────────────────────────────────────

  + ca-certificates              2024.2.2  hcefe29a_0          conda-forge         
  + ld_impl_linux-aarch64            2.40  h2d8c526_0          conda-forge         
  + libgomp                        13.2.0  hf8544c7_5          conda-forge         
  + libstdcxx-ng                   13.2.0  h9a76618_5          conda-forge         
  + pybind11-abi                        4  hd8ed1ab_3          conda-forge         
  + python_abi                       3.10  4_cp310             conda-forge         
  + tzdata                          2024a  h0c530f3_0          conda-forge         
  + _openmp_mutex                     4.5  2_gnu               conda-forge         
  + libgcc-ng                      13.2.0  hf8544c7_5          conda-forge         
  + bzip2                           1.0.8  h31becfc_5          conda-forge         
  + c-ares                         1.28.1  h31becfc_0          conda-forge         
  + fmt                            10.2.1  h2a328a1_0          conda-forge         
  + icu                              73.2  h787c7f5_0          conda-forge         
  + keyutils                        1.6.1  h4e544f5_0          conda-forge         
  + libev                            4.33  h31becfc_2          conda-forge         
  + libffi                          3.4.2  h3557bc0_5          conda-forge         
  + libiconv                         1.17  h31becfc_2          conda-forge         
  + libnsl                          2.0.1  h31becfc_0          conda-forge         
  + libuuid                        2.38.1  hb4cce97_0          conda-forge         
  + libxcrypt                      4.4.36  h31becfc_1          conda-forge         
  + libzlib                        1.2.13  h31becfc_5          conda-forge         
  + lz4-c                           1.9.4  hd600fc2_0          conda-forge         
  + lzo                              2.10  h516909a_1000       conda-forge         
  + ncurses                  6.4.20240210  h0425590_0          conda-forge         
  + openssl                         3.2.1  h31becfc_1          conda-forge         
  + reproc                   14.2.4.post0  h31becfc_1          conda-forge         
  + xz                              5.2.6  h9cdd2b7_0          conda-forge         
  + yaml-cpp                        0.8.0  h2f0025b_0          conda-forge         
  + libedit                  3.1.20191231  he28a2e2_2          conda-forge         
  + libnghttp2                     1.58.0  hb0e430d_1          conda-forge         
  + libsolv                        0.7.28  hd84c7bf_2          conda-forge         
  + libsqlite                      3.45.2  h194ca79_0          conda-forge         
  + libssh2                        1.11.0  h492db2e_0          conda-forge         
  + libxml2                        2.12.6  h3091e33_1          conda-forge         
  + readline                          8.2  h8fc344f_1          conda-forge         
  + reproc-cpp               14.2.4.post0  h2f0025b_1          conda-forge         
  + tk                             8.6.13  h194ca79_0          conda-forge         
  + zstd                            1.5.5  h4c53e97_0          conda-forge         
  + krb5                           1.21.2  hc419048_0          conda-forge         
  + libarchive                      3.7.2  hd2f85e0_1          conda-forge         
  + python                        3.10.14  hbbe8eec_0_cpython  conda-forge         
  + libcurl                         8.7.1  h4e8248e_0          conda-forge         
  + menuinst                        2.0.2  py310h4c7bcd0_0     conda-forge         
  + archspec                        0.2.3  pyhd8ed1ab_0        conda-forge         
  + boltons                        24.0.0  pyhd8ed1ab_0        conda-forge         
  + brotli-python                   1.1.0  py310hbb3657e_1     conda-forge         
  + certifi                      2024.2.2  pyhd8ed1ab_0        conda-forge         
  + charset-normalizer              3.3.2  pyhd8ed1ab_0        conda-forge         
  + colorama                        0.4.6  pyhd8ed1ab_0        conda-forge         
  + distro                          1.9.0  pyhd8ed1ab_0        conda-forge         
  + idna                              3.7  pyhd8ed1ab_0        conda-forge         
  + jsonpointer                       2.4  py310h4c7bcd0_3     conda-forge         
  + libmamba                        1.5.8  hea3be6c_0          conda-forge         
  + packaging                        24.0  pyhd8ed1ab_0        conda-forge         
  + platformdirs                    4.2.0  pyhd8ed1ab_0        conda-forge         
  + pluggy                          1.4.0  pyhd8ed1ab_0        conda-forge         
  + pycosat                         0.6.6  py310hb299538_0     conda-forge         
  + pycparser                        2.22  pyhd8ed1ab_0        conda-forge         
  + pysocks                         1.7.1  pyha2e5f31_6        conda-forge         
  + ruamel.yaml.clib                0.2.8  py310hb299538_0     conda-forge         
  + setuptools                     69.5.1  pyhd8ed1ab_0        conda-forge         
  + truststore                      0.8.0  pyhd8ed1ab_0        conda-forge         
  + wheel                          0.43.0  pyhd8ed1ab_1        conda-forge         
  + cffi                           1.16.0  py310hce94938_0     conda-forge         
  + jsonpatch                        1.33  pyhd8ed1ab_0        conda-forge         
  + libmambapy                      1.5.8  py310h5938bc3_0     conda-forge         
  + pip                              24.0  pyhd8ed1ab_0        conda-forge         
  + ruamel.yaml                    0.18.6  py310hb299538_0     conda-forge         
  + tqdm                           4.66.2  pyhd8ed1ab_0        conda-forge         
  + urllib3                         2.2.1  pyhd8ed1ab_0        conda-forge         
  + requests                       2.31.0  pyhd8ed1ab_0        conda-forge         
  + zstandard                      0.22.0  py310h468e293_0     conda-forge         
  + conda-package-streaming         0.9.0  pyhd8ed1ab_0        conda-forge         
  + conda-package-handling          2.2.0  pyh38be061_0        conda-forge         
  + conda                          24.3.0  py310h4c7bcd0_0     conda-forge         
  + conda-libmamba-solver          24.1.0  pyhd8ed1ab_0        conda-forge         
  + mamba                           1.5.8  py310hcbdc16a_0     conda-forge         

  Summary:

  Install: 77 packages

  Total download: 0 B

─────────────────────────────────────────────────────────────────────────────────────



Transaction starting
Linking ca-certificates-2024.2.2-hcefe29a_0
Linking ld_impl_linux-aarch64-2.40-h2d8c526_0
Linking libgomp-13.2.0-hf8544c7_5
Linking libstdcxx-ng-13.2.0-h9a76618_5
Linking pybind11-abi-4-hd8ed1ab_3
Linking python_abi-3.10-4_cp310
Linking tzdata-2024a-h0c530f3_0
Linking _openmp_mutex-4.5-2_gnu
Linking libgcc-ng-13.2.0-hf8544c7_5
Linking bzip2-1.0.8-h31becfc_5
Linking c-ares-1.28.1-h31becfc_0
Linking fmt-10.2.1-h2a328a1_0
Linking icu-73.2-h787c7f5_0
Linking keyutils-1.6.1-h4e544f5_0
Linking libev-4.33-h31becfc_2
Linking libffi-3.4.2-h3557bc0_5
Linking libiconv-1.17-h31becfc_2
Linking libnsl-2.0.1-h31becfc_0
Linking libuuid-2.38.1-hb4cce97_0
Linking libxcrypt-4.4.36-h31becfc_1
Linking libzlib-1.2.13-h31becfc_5
Linking lz4-c-1.9.4-hd600fc2_0
Linking lzo-2.10-h516909a_1000
Linking ncurses-6.4.20240210-h0425590_0
Linking openssl-3.2.1-h31becfc_1
Linking reproc-14.2.4.post0-h31becfc_1
Linking xz-5.2.6-h9cdd2b7_0
Linking yaml-cpp-0.8.0-h2f0025b_0
Linking libedit-3.1.20191231-he28a2e2_2
Linking libnghttp2-1.58.0-hb0e430d_1
Linking libsolv-0.7.28-hd84c7bf_2
Linking libsqlite-3.45.2-h194ca79_0
Linking libssh2-1.11.0-h492db2e_0
Linking libxml2-2.12.6-h3091e33_1
Linking readline-8.2-h8fc344f_1
Linking reproc-cpp-14.2.4.post0-h2f0025b_1
Linking tk-8.6.13-h194ca79_0
Linking zstd-1.5.5-h4c53e97_0
Linking krb5-1.21.2-hc419048_0
Linking libarchive-3.7.2-hd2f85e0_1
Linking python-3.10.14-hbbe8eec_0_cpython
Linking libcurl-8.7.1-h4e8248e_0
Linking menuinst-2.0.2-py310h4c7bcd0_0
Linking archspec-0.2.3-pyhd8ed1ab_0
Linking boltons-24.0.0-pyhd8ed1ab_0
Linking brotli-python-1.1.0-py310hbb3657e_1
Linking certifi-2024.2.2-pyhd8ed1ab_0
Linking charset-normalizer-3.3.2-pyhd8ed1ab_0
Linking colorama-0.4.6-pyhd8ed1ab_0
Linking distro-1.9.0-pyhd8ed1ab_0
Linking idna-3.7-pyhd8ed1ab_0
Linking jsonpointer-2.4-py310h4c7bcd0_3
Linking libmamba-1.5.8-hea3be6c_0
Linking packaging-24.0-pyhd8ed1ab_0
Linking platformdirs-4.2.0-pyhd8ed1ab_0
Linking pluggy-1.4.0-pyhd8ed1ab_0
Linking pycosat-0.6.6-py310hb299538_0
Linking pycparser-2.22-pyhd8ed1ab_0
Linking pysocks-1.7.1-pyha2e5f31_6
Linking ruamel.yaml.clib-0.2.8-py310hb299538_0
Linking setuptools-69.5.1-pyhd8ed1ab_0
Linking truststore-0.8.0-pyhd8ed1ab_0
Linking wheel-0.43.0-pyhd8ed1ab_1
Linking cffi-1.16.0-py310hce94938_0
Linking jsonpatch-1.33-pyhd8ed1ab_0
Linking libmambapy-1.5.8-py310h5938bc3_0
Linking pip-24.0-pyhd8ed1ab_0
Linking ruamel.yaml-0.18.6-py310hb299538_0
Linking tqdm-4.66.2-pyhd8ed1ab_0
Linking urllib3-2.2.1-pyhd8ed1ab_0
Linking requests-2.31.0-pyhd8ed1ab_0
Linking zstandard-0.22.0-py310h468e293_0
Linking conda-package-streaming-0.9.0-pyhd8ed1ab_0
Linking conda-package-handling-2.2.0-pyh38be061_0
Linking conda-24.3.0-py310h4c7bcd0_0
Linking conda-libmamba-solver-24.1.0-pyhd8ed1ab_0
Linking mamba-1.5.8-py310hcbdc16a_0

Transaction finished

To activate this environment, use:

    micromamba activate /home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/0

Or to execute a single command in this environment, use:

    micromamba run -p /home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/0 mycommand

installation finished.
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/basilisk.utils/1.17.2/test

  added / updated specs:
    - python=3.10.14


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    bzip2-1.0.8                |       h68df207_7         185 KB  conda-forge
    ca-certificates-2024.7.4   |       hcefe29a_0         151 KB  conda-forge
    ld_impl_linux-aarch64-2.40 |       h9fc2d93_7         719 KB  conda-forge
    libgcc-ng-14.1.0           |       he277a41_0         520 KB  conda-forge
    libgomp-14.1.0             |       he277a41_0         449 KB  conda-forge
    libsqlite-3.46.0           |       hf51ef55_0        1019 KB  conda-forge
    libzlib-1.3.1              |       h68df207_1          66 KB  conda-forge
    ncurses-6.5                |       hcccb83c_1         903 KB  conda-forge
    openssl-3.3.1              |       h86ecc28_3         3.3 MB  conda-forge
    pip-24.2                   |     pyhd8ed1ab_0         1.2 MB  conda-forge
    setuptools-72.2.0          |     pyhd8ed1ab_0         1.4 MB  conda-forge
    wheel-0.44.0               |     pyhd8ed1ab_0          57 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         9.8 MB

The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/tmp/RtmpDa3dtr/file2ec4d47780ada3/1.17.2/basilisk.utils/1.17.2/test

  added / updated specs:
    - pandas=1.4.3
    - python=3.10.14


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    libblas-3.9.0              |23_linuxaarch64_openblas          15 KB  conda-forge
    libcblas-3.9.0             |23_linuxaarch64_openblas          14 KB  conda-forge
    libgfortran-ng-14.1.0      |       he9431aa_0          49 KB  conda-forge
    libgfortran5-14.1.0        |       h9420597_0         1.0 MB  conda-forge
    liblapack-3.9.0            |23_linuxaarch64_openblas          14 KB  conda-forge
    libopenblas-0.3.27         |pthreads_h076ed1e_1         4.1 MB  conda-forge
    libstdcxx-ng-14.1.0        |       h3f4de04_0         3.6 MB  conda-forge
    numpy-1.26.4               |  py310hcbab775_0         5.8 MB  conda-forge
    pandas-1.4.3               |  py310h9e1bc84_0        12.1 MB  conda-forge
    python-dateutil-2.9.0      |     pyhd8ed1ab_0         218 KB  conda-forge
    python_abi-3.10            |          5_cp310           6 KB  conda-forge
    pytz-2024.1                |     pyhd8ed1ab_0         184 KB  conda-forge
    six-1.16.0                 |     pyh6c4a22f_0          14 KB  conda-forge
    ------------------------------------------------------------
                                           Total:        27.2 MB

The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.3-py310h9e1bc84_0 
  python-dateutil    conda-forge/noarch::python-dateutil-2.9.0-pyhd8ed1ab_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2024.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/locality/1.17.2

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/locality/1.17.2

  added / updated specs:
    - pandas=1.4.3
    - python-dateutil=2.8.2
    - python=3.10.14
    - pytz=2022.2.1


The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.3-py310h9e1bc84_0 
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.2-pyhd8ed1ab_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2022.2.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/my_package_A

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/my_package_A

  added / updated specs:
    - pandas=1.4.3
    - python-dateutil=2.8.2
    - python=3.10.14
    - pytz=2022.2.1


The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.3-py310h9e1bc84_0 
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.2-pyhd8ed1ab_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2022.2.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/my_package_B

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.7.4-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.40-h9fc2d93_7 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.1.0-he277a41_0 
  libgomp            conda-forge/linux-aarch64::libgomp-14.1.0-he277a41_0 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.46.0-hf51ef55_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h68df207_1 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.3.1-h86ecc28_3 
  pip                conda-forge/noarch::pip-24.2-pyhd8ed1ab_0 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-72.2.0-pyhd8ed1ab_0 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024a-h0c530f3_0 
  wheel              conda-forge/noarch::wheel-0.44.0-pyhd8ed1ab_0 
  xz                 conda-forge/linux-aarch64::xz-5.2.6-h9cdd2b7_0 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.7.1

Please update conda by running

    $ conda update -n base -c conda-forge conda



## Package Plan ##

  environment location: /home/biocbuild/bbs-3.20-bioc/meat/basilisk.Rcheck/tests/testthat/install-test-client/my_package_B

  added / updated specs:
    - pandas=1.4.2
    - python-dateutil=2.8.1
    - python=3.10.14
    - pytz=2022.1


The following NEW packages will be INSTALLED:

  libblas            conda-forge/linux-aarch64::libblas-3.9.0-23_linuxaarch64_openblas 
  libcblas           conda-forge/linux-aarch64::libcblas-3.9.0-23_linuxaarch64_openblas 
  libgfortran-ng     conda-forge/linux-aarch64::libgfortran-ng-14.1.0-he9431aa_0 
  libgfortran5       conda-forge/linux-aarch64::libgfortran5-14.1.0-h9420597_0 
  liblapack          conda-forge/linux-aarch64::liblapack-3.9.0-23_linuxaarch64_openblas 
  libopenblas        conda-forge/linux-aarch64::libopenblas-0.3.27-pthreads_h076ed1e_1 
  libstdcxx-ng       conda-forge/linux-aarch64::libstdcxx-ng-14.1.0-h3f4de04_0 
  numpy              conda-forge/linux-aarch64::numpy-1.26.4-py310hcbab775_0 
  pandas             conda-forge/linux-aarch64::pandas-1.4.2-py310h9e1bc84_2 
  python-dateutil    conda-forge/noarch::python-dateutil-2.8.1-py_0 
  python_abi         conda-forge/linux-aarch64::python_abi-3.10-5_cp310 
  pytz               conda-forge/noarch::pytz-2022.1-pyhd8ed1ab_0 
  six                conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 



Downloading and Extracting Packages: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 61 ]

══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• On Linux aarch64 (1): 'test-install.R:35:5'

[ FAIL 0 | WARN 0 | SKIP 1 | PASS 61 ]
> 
> proc.time()
    user   system  elapsed 
 565.090  153.389 1019.456

Example timings

basilisk.Rcheck/basilisk-Ex.timings

nameusersystemelapsed
BasiliskEnvironment-class0.0040.0000.003
PyPiLink000
basiliskOptions0.0000.0010.000
basiliskStart103.325 6.371129.197
configureBasiliskEnv000
createLocalBasiliskEnv50.159 3.05258.046
listPackages0.8540.1001.217
obtainEnvironmentPath0.0040.0000.004
setupBasiliskEnv0.0030.0000.003
useBasiliskEnv0.5930.0870.596