Multiple platform build/check report for BioC 3.20 - BUILD results for methylPipe on kjohnson3

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4501
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4761
palomino8	Windows Server 2022 Datacenter	x64	4.4.1 (2024-06-14 ucrt) -- "Race for Your Life"	4504
lconway	macOS 12.7.1 Monterey	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4535
kjohnson3	macOS 13.6.5 Ventura	arm64	4.4.1 (2024-06-14) -- "Race for Your Life"	4483
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.4.1 (2024-06-14) -- "Race for Your Life"	4491
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for methylPipe on kjohnson3

To the developers/maintainers of the methylPipe package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/methylPipe.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: methylPipe

Version: 1.39.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe

StartedAt: 2024-10-27 06:54:22 -0400 (Sun, 27 Oct 2024)

EndedAt: 2024-10-27 06:55:26 -0400 (Sun, 27 Oct 2024)

EllapsedTime: 63.7 seconds

RetCode: 0

Status: OK

PackageFile: methylPipe_1.39.0.tar.gz

PackageFileSize: 792.5 KiB

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe
###
##############################################################################
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* checking for file ‘methylPipe/DESCRIPTION’ ... OK
* preparing ‘methylPipe’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘methylPipe/inst/extdata/DMRs.Rdata’
    ‘methylPipe/inst/extdata/GR_chr20.Rdata’
    ‘methylPipe/inst/extdata/gec.H1.Rdata’
    ‘methylPipe/inst/extdata/gec.IMR90.Rdata’
    ‘methylPipe/inst/extdata/uncov_GR.Rdata’
* building ‘methylPipe_1.39.0.tar.gz’