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This page was generated on 2024-08-27 11:46 -0400 (Tue, 27 Aug 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4703
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4440
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4472
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4421
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4415
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1945/2255HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
simplifyEnrichment 1.15.0  (landing page)
Zuguang Gu
Snapshot Date: 2024-08-26 14:00 -0400 (Mon, 26 Aug 2024)
git_url: https://git.bioconductor.org/packages/simplifyEnrichment
git_branch: devel
git_last_commit: ffc1a5a
git_last_commit_date: 2024-04-30 11:24:30 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for simplifyEnrichment on kjohnson3

To the developers/maintainers of the simplifyEnrichment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/simplifyEnrichment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: simplifyEnrichment
Version: 1.15.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data simplifyEnrichment
StartedAt: 2024-08-26 18:47:51 -0400 (Mon, 26 Aug 2024)
EndedAt: 2024-08-26 18:51:59 -0400 (Mon, 26 Aug 2024)
EllapsedTime: 247.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data simplifyEnrichment
###
##############################################################################
##############################################################################


* checking for file ‘simplifyEnrichment/DESCRIPTION’ ... OK
* preparing ‘simplifyEnrichment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘interactive.Rmd’ using rmarkdown
--- finished re-building ‘interactive.Rmd’

--- re-building ‘simplifyEnrichment.Rmd’ using rmarkdown
2024-08-26 18:49:34.771 R[8556:259676613] XType: Using static font registry.

Quitting from lines 307-308 [unnamed-chunk-18] (simplifyEnrichment.Rmd)
Error: processing vignette 'simplifyEnrichment.Rmd' failed with diagnostics:
unable to find an inherited method for function 'Lkeys' for signature 'x = "list"'
--- failed re-building ‘simplifyEnrichment.Rmd’

--- re-building ‘word_cloud_anno.Rmd’ using rmarkdown
--- finished re-building ‘word_cloud_anno.Rmd’

SUMMARY: processing the following file failed:
  ‘simplifyEnrichment.Rmd’

Error: Vignette re-building failed.
Execution halted