| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-03 12:03 -0500 (Mon, 03 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4902 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4692 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4638 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1378/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.16.0 (landing page) Christian Panse
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.16.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings MsBackendRawFileReader_1.16.0.tar.gz |
| StartedAt: 2025-11-03 02:06:52 -0500 (Mon, 03 Nov 2025) |
| EndedAt: 2025-11-03 02:11:29 -0500 (Mon, 03 Nov 2025) |
| EllapsedTime: 277.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings MsBackendRawFileReader_1.16.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.16.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 32.033 6.053 11.211
MsBackendRawFileReader 6.285 2.118 8.908
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** this is package ‘MsBackendRawFileReader’ version ‘1.16.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
>
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [3.8s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠦ | 17 | spectra_subsetting
⠋ | 31 | spectra_subsetting
⠴ | 46 | spectra_subsetting
⠇ | 59 | spectra_subsetting
⠹ | 73 | spectra_subsetting
⠇ | 89 | spectra_subsetting
⠹ | 103 | spectra_subsetting
⠋ | 121 | spectra_subsetting
⠴ | 136 | spectra_subsetting
⠋ | 151 | spectra_subsetting
⠴ | 166 | spectra_subsetting
⠋ | 181 | spectra_subsetting
⠧ | 198 | spectra_subsetting
⠙ | 212 | spectra_subsetting
⠧ | 228 | spectra_subsetting
⠹ | 243 | spectra_subsetting
⠴ | 256 | spectra_subsetting
⠙ | 272 | spectra_subsetting
⠴ | 286 | spectra_subsetting
⠙ | 302 | spectra_subsetting
⠧ | 318 | spectra_subsetting
⠋ | 331 | spectra_subsetting
⠴ | 346 | spectra_subsetting
⠋ | 361 | spectra_subsetting
⠦ | 377 | spectra_subsetting
⠋ | 391 | spectra_subsetting
⠴ | 406 | spectra_subsetting
⠙ | 422 | spectra_subsetting
⠴ | 436 | spectra_subsetting
⠸ | 454 | spectra_subsetting
⠇ | 469 | spectra_subsetting
⠼ | 485 | spectra_subsetting
⠙ | 502 | spectra_subsetting
⠦ | 517 | spectra_subsetting
⠙ | 532 | spectra_subsetting
⠼ | 545 | spectra_subsetting
⠏ | 560 | spectra_subsetting
⠼ | 575 | spectra_subsetting
⠇ | 589 | spectra_subsetting
⠴ | 606 | spectra_subsetting
⠇ | 619 | spectra_subsetting
⠼ | 635 | spectra_subsetting
⠇ | 649 | spectra_subsetting
⠸ | 664 | spectra_subsetting
⠏ | 680 | spectra_subsetting
⠸ | 694 | spectra_subsetting
⠙ | 712 | spectra_subsetting
⠦ | 727 | spectra_subsetting
⠹ | 743 | spectra_subsetting
⠧ | 758 | spectra_subsetting
⠙ | 772 | spectra_subsetting
⠧ | 788 | spectra_subsetting
⠙ | 802 | spectra_subsetting
⠏ | 820 | spectra_subsetting
⠼ | 835 | spectra_subsetting
⠋ | 851 | spectra_subsetting
⠧ | 868 | spectra_subsetting
⠹ | 883 | spectra_subsetting
⠋ | 901 | spectra_subsetting
⠴ | 916 | spectra_subsetting
⠹ | 933 | spectra_subsetting
⠴ | 946 | spectra_subsetting
⠋ | 961 | spectra_subsetting
⠹ | 973 | spectra_subsetting
⠼ | 985 | spectra_subsetting
⠏ | 1000 | spectra_subsetting
⠼ | 1015 | spectra_subsetting
⠏ | 1030 | spectra_subsetting
⠧ | 1048 | spectra_subsetting
⠹ | 1063 | spectra_subsetting
⠇ | 1079 | spectra_subsetting
⠹ | 1093 | spectra_subsetting
⠧ | 1108 | spectra_subsetting
⠹ | 1123 | spectra_subsetting
⠧ | 1138 | spectra_subsetting
⠸ | 1154 | spectra_subsetting
⠧ | 1168 | spectra_subsetting
⠴ | 1186 | spectra_subsetting
⠋ | 1201 | spectra_subsetting
⠦ | 1217 | spectra_subsetting
⠸ | 1234 | spectra_subsetting
⠇ | 1249 | spectra_subsetting
⠼ | 1265 | spectra_subsetting
⠇ | 1279 | spectra_subsetting
⠦ | 1297 | spectra_subsetting
⠙ | 1312 | spectra_subsetting
⠧ | 1328 | spectra_subsetting
⠹ | 1343 | spectra_subsetting
⠧ | 1358 | spectra_subsetting
⠸ | 1374 | spectra_subsetting
⠦ | 1387 | spectra_subsetting
⠼ | 1405 | spectra_subsetting
⠏ | 1420 | spectra_subsetting
⠼ | 1435 | spectra_subsetting
⠏ | 1450 | spectra_subsetting
⠼ | 1465 | spectra_subsetting
⠋ | 1481 | spectra_subsetting
⠼ | 1495 | spectra_subsetting
⠙ | 1512 | spectra_subsetting
⠼ | 1525 | spectra_subsetting
⠇ | 1539 | spectra_subsetting
⠹ | 1553 | spectra_subsetting
⠦ | 1567 | spectra_subsetting
⠹ | 1583 | spectra_subsetting
⠦ | 1597 | spectra_subsetting
⠙ | 1612 | spectra_subsetting
⠧ | 1628 | spectra_subsetting
⠙ | 1642 | spectra_subsetting
⠇ | 1659 | spectra_subsetting
⠙ | 1672 | spectra_subsetting
⠦ | 1687 | spectra_subsetting
⠸ | 1704 | spectra_subsetting
⠦ | 1717 | spectra_subsetting
⠦ | 1727 | spectra_subsetting
⠇ | 1729 | spectra_subsetting
⠙ | 1732 | spectra_subsetting
⠸ | 1734 | spectra_subsetting
⠦ | 1737 | spectra_subsetting
⠏ | 1740 | spectra_subsetting
⠙ | 1742 | spectra_subsetting
⠼ | 1745 | spectra_subsetting
⠧ | 1748 | spectra_subsetting
⠋ | 1751 | spectra_subsetting
⠸ | 1754 | spectra_subsetting
⠴ | 1756 | spectra_subsetting
⠇ | 1759 | spectra_subsetting
⠙ | 1762 | spectra_subsetting
⠸ | 1764 | spectra_subsetting
⠦ | 1767 | spectra_subsetting
⠇ | 1769 | spectra_subsetting
⠙ | 1772 | spectra_subsetting
⠼ | 1775 | spectra_subsetting
⠧ | 1778 | spectra_subsetting
⠋ | 1781 | spectra_subsetting
⠸ | 1784 | spectra_subsetting
⠴ | 1786 | spectra_subsetting
⠇ | 1789 | spectra_subsetting
⠋ | 1791 | spectra_subsetting
⠹ | 1793 | spectra_subsetting
⠼ | 1795 | spectra_subsetting
⠧ | 1798 | spectra_subsetting
⠋ | 1801 | spectra_subsetting
⠸ | 1804 | spectra_subsetting
⠦ | 1807 | spectra_subsetting
⠇ | 1809 | spectra_subsetting
⠙ | 1812 | spectra_subsetting
⠼ | 1815 | spectra_subsetting
⠦ | 1817 | spectra_subsetting
⠏ | 1820 | spectra_subsetting
⠙ | 1822 | spectra_subsetting
⠼ | 1825 | spectra_subsetting
⠧ | 1828 | spectra_subsetting
⠏ | 1830 | spectra_subsetting
⠹ | 1833 | spectra_subsetting
⠼ | 1835 | spectra_subsetting
⠧ | 1838 | spectra_subsetting
⠏ | 1840 | spectra_subsetting
⠹ | 1843 | spectra_subsetting
⠼ | 1845 | spectra_subsetting
⠧ | 1848 | spectra_subsetting
⠋ | 1851 | spectra_subsetting
⠸ | 1854 | spectra_subsetting
⠦ | 1857 | spectra_subsetting
⠏ | 1860 | spectra_subsetting
⠹ | 1863 | spectra_subsetting
⠴ | 1866 | spectra_subsetting
⠇ | 1869 | spectra_subsetting
⠙ | 1872 | spectra_subsetting
⠼ | 1875 | spectra_subsetting
⠧ | 1878 | spectra_subsetting
⠏ | 1880 | spectra_subsetting
⠹ | 1883 | spectra_subsetting
⠴ | 1886 | spectra_subsetting
⠧ | 1888 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠸ | 1894 | spectra_subsetting
⠴ | 1896 | spectra_subsetting
⠇ | 1899 | spectra_subsetting
⠋ | 1901 | spectra_subsetting
⠸ | 1904 | spectra_subsetting
⠦ | 1907 | spectra_subsetting
⠏ | 1910 | spectra_subsetting
⠹ | 1913 | spectra_subsetting
⠴ | 1916 | spectra_subsetting
⠇ | 1919 | spectra_subsetting
⠙ | 1922 | spectra_subsetting
⠼ | 1925 | spectra_subsetting
⠧ | 1928 | spectra_subsetting
⠋ | 1931 | spectra_subsetting
⠸ | 1934 | spectra_subsetting
⠦ | 1937 | spectra_subsetting
⠏ | 1940 | spectra_subsetting
⠹ | 1943 | spectra_subsetting
⠴ | 1946 | spectra_subsetting
⠇ | 1949 | spectra_subsetting
⠙ | 1952 | spectra_subsetting
⠼ | 1955 | spectra_subsetting
⠧ | 1958 | spectra_subsetting
⠋ | 1961 | spectra_subsetting
⠸ | 1964 | spectra_subsetting
⠦ | 1967 | spectra_subsetting
⠏ | 1970 | spectra_subsetting
⠹ | 1973 | spectra_subsetting
⠴ | 1976 | spectra_subsetting
⠇ | 1979 | spectra_subsetting
⠙ | 1982 | spectra_subsetting
⠼ | 1985 | spectra_subsetting
⠧ | 1988 | spectra_subsetting
⠋ | 1991 | spectra_subsetting
⠸ | 1994 | spectra_subsetting
⠦ | 1997 | spectra_subsetting
⠏ | 2000 | spectra_subsetting
⠹ | 2003 | spectra_subsetting
⠴ | 2006 | spectra_subsetting
⠇ | 2009 | spectra_subsetting
⠙ | 2012 | spectra_subsetting
⠼ | 2015 | spectra_subsetting
⠧ | 2018 | spectra_subsetting
⠋ | 2021 | spectra_subsetting
⠸ | 2024 | spectra_subsetting
⠦ | 2027 | spectra_subsetting
⠏ | 2030 | spectra_subsetting
⠹ | 2033 | spectra_subsetting
⠴ | 2036 | spectra_subsetting
⠇ | 2039 | spectra_subsetting
⠙ | 2042 | spectra_subsetting
⠼ | 2045 | spectra_subsetting
⠧ | 2048 | spectra_subsetting
⠋ | 2051 | spectra_subsetting
⠸ | 2054 | spectra_subsetting
⠦ | 2057 | spectra_subsetting
⠇ | 2059 | spectra_subsetting
⠙ | 2062 | spectra_subsetting
⠼ | 2065 | spectra_subsetting
⠧ | 2068 | spectra_subsetting
⠋ | 2071 | spectra_subsetting
⠸ | 2074 | spectra_subsetting
⠦ | 2077 | spectra_subsetting
⠏ | 2080 | spectra_subsetting
⠹ | 2083 | spectra_subsetting
⠴ | 2086 | spectra_subsetting
⠇ | 2089 | spectra_subsetting
⠙ | 2092 | spectra_subsetting
⠼ | 2095 | spectra_subsetting
⠧ | 2098 | spectra_subsetting
⠋ | 2101 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠦ | 2107 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠹ | 2113 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠇ | 2119 | spectra_subsetting
⠙ | 2122 | spectra_subsetting
⠼ | 2125 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠋ | 2131 | spectra_subsetting
⠸ | 2134 | spectra_subsetting
⠦ | 2137 | spectra_subsetting
⠏ | 2140 | spectra_subsetting
⠹ | 2143 | spectra_subsetting
⠴ | 2146 | spectra_subsetting
⠇ | 2149 | spectra_subsetting
⠙ | 2152 | spectra_subsetting
⠼ | 2155 | spectra_subsetting
⠧ | 2158 | spectra_subsetting
⠋ | 2161 | spectra_subsetting
⠸ | 2164 | spectra_subsetting
⠦ | 2167 | spectra_subsetting
⠏ | 2170 | spectra_subsetting
⠹ | 2173 | spectra_subsetting
⠴ | 2176 | spectra_subsetting
⠇ | 2179 | spectra_subsetting
⠙ | 2182 | spectra_subsetting
⠼ | 2185 | spectra_subsetting
⠧ | 2188 | spectra_subsetting
⠋ | 2191 | spectra_subsetting
⠸ | 2194 | spectra_subsetting
⠦ | 2197 | spectra_subsetting
⠏ | 2200 | spectra_subsetting
⠹ | 2203 | spectra_subsetting
⠴ | 2206 | spectra_subsetting
⠇ | 2209 | spectra_subsetting
⠙ | 2212 | spectra_subsetting
⠼ | 2215 | spectra_subsetting
⠧ | 2218 | spectra_subsetting
⠋ | 2221 | spectra_subsetting
⠸ | 2224 | spectra_subsetting
⠦ | 2227 | spectra_subsetting
⠏ | 2230 | spectra_subsetting
⠹ | 2233 | spectra_subsetting
⠴ | 2236 | spectra_subsetting
⠇ | 2239 | spectra_subsetting
⠙ | 2242 | spectra_subsetting
⠼ | 2245 | spectra_subsetting
⠧ | 2248 | spectra_subsetting
⠋ | 2251 | spectra_subsetting
⠸ | 2254 | spectra_subsetting
⠦ | 2257 | spectra_subsetting
⠏ | 2260 | spectra_subsetting
⠹ | 2263 | spectra_subsetting
⠴ | 2266 | spectra_subsetting
⠇ | 2269 | spectra_subsetting
⠙ | 2272 | spectra_subsetting
⠼ | 2275 | spectra_subsetting
⠧ | 2278 | spectra_subsetting
⠋ | 2281 | spectra_subsetting
⠸ | 2284 | spectra_subsetting
⠦ | 2287 | spectra_subsetting
⠏ | 2290 | spectra_subsetting
⠹ | 2293 | spectra_subsetting
⠴ | 2296 | spectra_subsetting
⠇ | 2299 | spectra_subsetting
⠹ | 2303 | spectra_subsetting
⠙ | 2312 | spectra_subsetting
⠇ | 2319 | spectra_subsetting
⠇ | 2329 | spectra_subsetting
⠸ | 2334 | spectra_subsetting
✔ | 2342 | spectra_subsetting [39.8s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠦ | 27 | spectra_variables
⠇ | 29 | spectra_variables
⠋ | 31 | spectra_variables
⠹ | 43 | spectra_variables
⠙ | 1 61 | spectra_variables
✔ | 1 62 | spectra_variables [13.7s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 57.4 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2408 ]
>
> proc.time()
user system elapsed
78.441 7.790 88.733
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 2.991 | 0.798 | 3.991 | |
| MsBackendRawFileReader | 6.285 | 2.118 | 8.908 | |
| hidden_aliases | 2.043 | 0.650 | 2.971 | |
| ioBenchmark | 32.033 | 6.053 | 11.211 | |