| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-30 12:05 -0400 (Sat, 30 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4824 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4615 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4562 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4541 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1355/2320 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.15.1 (landing page) Christian Panse
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.15.1 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings MsBackendRawFileReader_1.15.1.tar.gz |
| StartedAt: 2025-08-30 00:53:37 -0400 (Sat, 30 Aug 2025) |
| EndedAt: 2025-08-30 00:58:20 -0400 (Sat, 30 Aug 2025) |
| EllapsedTime: 283.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings MsBackendRawFileReader_1.15.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.15.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 32.515 6.162 11.760
MsBackendRawFileReader 6.361 2.098 9.139
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** this is package ‘MsBackendRawFileReader’ version ‘1.15.1’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
>
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [3.8s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠦ | 17 | spectra_subsetting
⠇ | 29 | spectra_subsetting
⠸ | 44 | spectra_subsetting
⠧ | 58 | spectra_subsetting
⠹ | 73 | spectra_subsetting
⠧ | 88 | spectra_subsetting
⠹ | 103 | spectra_subsetting
⠧ | 118 | spectra_subsetting
⠹ | 133 | spectra_subsetting
⠧ | 148 | spectra_subsetting
⠹ | 163 | spectra_subsetting
⠧ | 178 | spectra_subsetting
⠸ | 194 | spectra_subsetting
⠧ | 208 | spectra_subsetting
⠹ | 223 | spectra_subsetting
⠇ | 239 | spectra_subsetting
⠹ | 253 | spectra_subsetting
⠇ | 269 | spectra_subsetting
⠹ | 283 | spectra_subsetting
⠧ | 298 | spectra_subsetting
⠹ | 313 | spectra_subsetting
⠼ | 325 | spectra_subsetting
⠏ | 340 | spectra_subsetting
⠸ | 354 | spectra_subsetting
⠦ | 367 | spectra_subsetting
⠹ | 383 | spectra_subsetting
⠦ | 397 | spectra_subsetting
⠹ | 413 | spectra_subsetting
⠦ | 427 | spectra_subsetting
⠙ | 442 | spectra_subsetting
⠦ | 457 | spectra_subsetting
⠋ | 471 | spectra_subsetting
⠦ | 487 | spectra_subsetting
⠙ | 502 | spectra_subsetting
⠦ | 517 | spectra_subsetting
⠙ | 532 | spectra_subsetting
⠼ | 545 | spectra_subsetting
⠏ | 560 | spectra_subsetting
⠸ | 574 | spectra_subsetting
⠇ | 589 | spectra_subsetting
⠸ | 604 | spectra_subsetting
⠦ | 617 | spectra_subsetting
⠙ | 632 | spectra_subsetting
⠴ | 646 | spectra_subsetting
⠋ | 661 | spectra_subsetting
⠴ | 676 | spectra_subsetting
⠏ | 690 | spectra_subsetting
⠸ | 704 | spectra_subsetting
⠧ | 718 | spectra_subsetting
⠋ | 731 | spectra_subsetting
⠼ | 745 | spectra_subsetting
⠏ | 760 | spectra_subsetting
⠼ | 775 | spectra_subsetting
⠏ | 790 | spectra_subsetting
⠙ | 802 | spectra_subsetting
⠦ | 817 | spectra_subsetting
⠙ | 832 | spectra_subsetting
⠦ | 847 | spectra_subsetting
⠙ | 862 | spectra_subsetting
⠸ | 874 | spectra_subsetting
⠇ | 889 | spectra_subsetting
⠸ | 904 | spectra_subsetting
⠇ | 919 | spectra_subsetting
⠸ | 934 | spectra_subsetting
⠦ | 947 | spectra_subsetting
⠋ | 961 | spectra_subsetting
⠴ | 976 | spectra_subsetting
⠋ | 991 | spectra_subsetting
⠴ | 1006 | spectra_subsetting
⠇ | 1019 | spectra_subsetting
⠹ | 1033 | spectra_subsetting
⠧ | 1048 | spectra_subsetting
⠏ | 1060 | spectra_subsetting
⠼ | 1075 | spectra_subsetting
⠏ | 1090 | spectra_subsetting
⠼ | 1105 | spectra_subsetting
⠏ | 1120 | spectra_subsetting
⠹ | 1133 | spectra_subsetting
⠧ | 1148 | spectra_subsetting
⠙ | 1162 | spectra_subsetting
⠦ | 1177 | spectra_subsetting
⠙ | 1192 | spectra_subsetting
⠼ | 1205 | spectra_subsetting
⠏ | 1220 | spectra_subsetting
⠸ | 1234 | spectra_subsetting
⠇ | 1249 | spectra_subsetting
⠸ | 1264 | spectra_subsetting
⠴ | 1276 | spectra_subsetting
⠋ | 1291 | spectra_subsetting
⠼ | 1305 | spectra_subsetting
⠧ | 1318 | spectra_subsetting
⠹ | 1333 | spectra_subsetting
⠼ | 1345 | spectra_subsetting
⠏ | 1360 | spectra_subsetting
⠼ | 1375 | spectra_subsetting
⠦ | 1387 | spectra_subsetting
⠙ | 1402 | spectra_subsetting
⠦ | 1417 | spectra_subsetting
⠙ | 1432 | spectra_subsetting
⠦ | 1447 | spectra_subsetting
⠇ | 1459 | spectra_subsetting
⠸ | 1474 | spectra_subsetting
⠇ | 1489 | spectra_subsetting
⠸ | 1504 | spectra_subsetting
⠇ | 1519 | spectra_subsetting
⠸ | 1534 | spectra_subsetting
⠇ | 1549 | spectra_subsetting
⠋ | 1561 | spectra_subsetting
⠴ | 1576 | spectra_subsetting
⠋ | 1591 | spectra_subsetting
⠸ | 1604 | spectra_subsetting
⠧ | 1618 | spectra_subsetting
⠹ | 1633 | spectra_subsetting
⠧ | 1648 | spectra_subsetting
⠹ | 1663 | spectra_subsetting
⠴ | 1676 | spectra_subsetting
⠏ | 1690 | spectra_subsetting
⠼ | 1705 | spectra_subsetting
⠏ | 1720 | spectra_subsetting
⠦ | 1727 | spectra_subsetting
⠇ | 1729 | spectra_subsetting
⠙ | 1732 | spectra_subsetting
⠸ | 1734 | spectra_subsetting
⠦ | 1737 | spectra_subsetting
⠏ | 1740 | spectra_subsetting
⠙ | 1742 | spectra_subsetting
⠼ | 1745 | spectra_subsetting
⠦ | 1747 | spectra_subsetting
⠏ | 1750 | spectra_subsetting
⠹ | 1753 | spectra_subsetting
⠼ | 1755 | spectra_subsetting
⠧ | 1758 | spectra_subsetting
⠏ | 1760 | spectra_subsetting
⠹ | 1763 | spectra_subsetting
⠼ | 1765 | spectra_subsetting
⠧ | 1768 | spectra_subsetting
⠋ | 1771 | spectra_subsetting
⠹ | 1773 | spectra_subsetting
⠴ | 1776 | spectra_subsetting
⠇ | 1779 | spectra_subsetting
⠋ | 1781 | spectra_subsetting
⠸ | 1784 | spectra_subsetting
⠴ | 1786 | spectra_subsetting
⠇ | 1789 | spectra_subsetting
⠋ | 1791 | spectra_subsetting
⠸ | 1794 | spectra_subsetting
⠦ | 1797 | spectra_subsetting
⠇ | 1799 | spectra_subsetting
⠙ | 1802 | spectra_subsetting
⠸ | 1804 | spectra_subsetting
⠦ | 1807 | spectra_subsetting
⠏ | 1810 | spectra_subsetting
⠙ | 1812 | spectra_subsetting
⠸ | 1814 | spectra_subsetting
⠴ | 1816 | spectra_subsetting
⠧ | 1818 | spectra_subsetting
⠋ | 1821 | spectra_subsetting
⠸ | 1824 | spectra_subsetting
⠴ | 1826 | spectra_subsetting
⠇ | 1829 | spectra_subsetting
⠋ | 1831 | spectra_subsetting
⠹ | 1833 | spectra_subsetting
⠼ | 1835 | spectra_subsetting
⠧ | 1838 | spectra_subsetting
⠋ | 1841 | spectra_subsetting
⠹ | 1843 | spectra_subsetting
⠴ | 1846 | spectra_subsetting
⠧ | 1848 | spectra_subsetting
⠋ | 1851 | spectra_subsetting
⠹ | 1853 | spectra_subsetting
⠴ | 1856 | spectra_subsetting
⠇ | 1859 | spectra_subsetting
⠋ | 1861 | spectra_subsetting
⠹ | 1863 | spectra_subsetting
⠼ | 1865 | spectra_subsetting
⠧ | 1868 | spectra_subsetting
⠏ | 1870 | spectra_subsetting
⠹ | 1873 | spectra_subsetting
⠴ | 1876 | spectra_subsetting
⠧ | 1878 | spectra_subsetting
⠋ | 1881 | spectra_subsetting
⠹ | 1883 | spectra_subsetting
⠴ | 1886 | spectra_subsetting
⠧ | 1888 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠸ | 1894 | spectra_subsetting
⠦ | 1897 | spectra_subsetting
⠏ | 1900 | spectra_subsetting
⠹ | 1903 | spectra_subsetting
⠴ | 1906 | spectra_subsetting
⠇ | 1909 | spectra_subsetting
⠙ | 1912 | spectra_subsetting
⠼ | 1915 | spectra_subsetting
⠧ | 1918 | spectra_subsetting
⠋ | 1921 | spectra_subsetting
⠸ | 1924 | spectra_subsetting
⠦ | 1927 | spectra_subsetting
⠏ | 1930 | spectra_subsetting
⠹ | 1933 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠇ | 1939 | spectra_subsetting
⠙ | 1942 | spectra_subsetting
⠼ | 1945 | spectra_subsetting
⠧ | 1948 | spectra_subsetting
⠋ | 1951 | spectra_subsetting
⠸ | 1954 | spectra_subsetting
⠦ | 1957 | spectra_subsetting
⠏ | 1960 | spectra_subsetting
⠹ | 1963 | spectra_subsetting
⠴ | 1966 | spectra_subsetting
⠇ | 1969 | spectra_subsetting
⠙ | 1972 | spectra_subsetting
⠼ | 1975 | spectra_subsetting
⠧ | 1978 | spectra_subsetting
⠋ | 1981 | spectra_subsetting
⠸ | 1984 | spectra_subsetting
⠴ | 1986 | spectra_subsetting
⠇ | 1989 | spectra_subsetting
⠙ | 1992 | spectra_subsetting
⠼ | 1995 | spectra_subsetting
⠧ | 1998 | spectra_subsetting
⠋ | 2001 | spectra_subsetting
⠸ | 2004 | spectra_subsetting
⠦ | 2007 | spectra_subsetting
⠏ | 2010 | spectra_subsetting
⠹ | 2013 | spectra_subsetting
⠴ | 2016 | spectra_subsetting
⠇ | 2019 | spectra_subsetting
⠙ | 2022 | spectra_subsetting
⠼ | 2025 | spectra_subsetting
⠧ | 2028 | spectra_subsetting
⠋ | 2031 | spectra_subsetting
⠸ | 2034 | spectra_subsetting
⠦ | 2037 | spectra_subsetting
⠏ | 2040 | spectra_subsetting
⠹ | 2043 | spectra_subsetting
⠴ | 2046 | spectra_subsetting
⠇ | 2049 | spectra_subsetting
⠙ | 2052 | spectra_subsetting
⠼ | 2055 | spectra_subsetting
⠧ | 2058 | spectra_subsetting
⠋ | 2061 | spectra_subsetting
⠸ | 2064 | spectra_subsetting
⠦ | 2067 | spectra_subsetting
⠏ | 2070 | spectra_subsetting
⠹ | 2073 | spectra_subsetting
⠴ | 2076 | spectra_subsetting
⠇ | 2079 | spectra_subsetting
⠋ | 2081 | spectra_subsetting
⠸ | 2084 | spectra_subsetting
⠦ | 2087 | spectra_subsetting
⠏ | 2090 | spectra_subsetting
⠹ | 2093 | spectra_subsetting
⠴ | 2096 | spectra_subsetting
⠇ | 2099 | spectra_subsetting
⠙ | 2102 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠦ | 2107 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠹ | 2113 | spectra_subsetting
⠴ | 2116 | spectra_subsetting
⠇ | 2119 | spectra_subsetting
⠙ | 2122 | spectra_subsetting
⠼ | 2125 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠋ | 2131 | spectra_subsetting
⠸ | 2134 | spectra_subsetting
⠦ | 2137 | spectra_subsetting
⠏ | 2140 | spectra_subsetting
⠹ | 2143 | spectra_subsetting
⠴ | 2146 | spectra_subsetting
⠇ | 2149 | spectra_subsetting
⠙ | 2152 | spectra_subsetting
⠼ | 2155 | spectra_subsetting
⠧ | 2158 | spectra_subsetting
⠋ | 2161 | spectra_subsetting
⠸ | 2164 | spectra_subsetting
⠦ | 2167 | spectra_subsetting
⠏ | 2170 | spectra_subsetting
⠹ | 2173 | spectra_subsetting
⠴ | 2176 | spectra_subsetting
⠇ | 2179 | spectra_subsetting
⠙ | 2182 | spectra_subsetting
⠼ | 2185 | spectra_subsetting
⠧ | 2188 | spectra_subsetting
⠏ | 2190 | spectra_subsetting
⠙ | 2192 | spectra_subsetting
⠸ | 2194 | spectra_subsetting
⠦ | 2197 | spectra_subsetting
⠏ | 2200 | spectra_subsetting
⠹ | 2203 | spectra_subsetting
⠴ | 2206 | spectra_subsetting
⠇ | 2209 | spectra_subsetting
⠙ | 2212 | spectra_subsetting
⠼ | 2215 | spectra_subsetting
⠧ | 2218 | spectra_subsetting
⠋ | 2221 | spectra_subsetting
⠸ | 2224 | spectra_subsetting
⠦ | 2227 | spectra_subsetting
⠏ | 2230 | spectra_subsetting
⠹ | 2233 | spectra_subsetting
⠴ | 2236 | spectra_subsetting
⠇ | 2239 | spectra_subsetting
⠙ | 2242 | spectra_subsetting
⠼ | 2245 | spectra_subsetting
⠧ | 2248 | spectra_subsetting
⠋ | 2251 | spectra_subsetting
⠸ | 2254 | spectra_subsetting
⠦ | 2257 | spectra_subsetting
⠏ | 2260 | spectra_subsetting
⠹ | 2263 | spectra_subsetting
⠼ | 2265 | spectra_subsetting
⠧ | 2268 | spectra_subsetting
⠏ | 2270 | spectra_subsetting
⠹ | 2273 | spectra_subsetting
⠼ | 2275 | spectra_subsetting
⠧ | 2278 | spectra_subsetting
⠋ | 2281 | spectra_subsetting
⠸ | 2284 | spectra_subsetting
⠦ | 2287 | spectra_subsetting
⠏ | 2290 | spectra_subsetting
⠹ | 2293 | spectra_subsetting
⠴ | 2296 | spectra_subsetting
⠇ | 2299 | spectra_subsetting
⠹ | 2303 | spectra_subsetting
⠙ | 2312 | spectra_subsetting
⠇ | 2319 | spectra_subsetting
⠇ | 2329 | spectra_subsetting
⠸ | 2334 | spectra_subsetting
✔ | 2342 | spectra_subsetting [41.9s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠦ | 27 | spectra_variables
⠇ | 29 | spectra_variables
⠋ | 31 | spectra_variables
⠹ | 43 | spectra_variables
⠋ | 1 60 | spectra_variables
✔ | 1 62 | spectra_variables [14.1s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 59.8 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2408 ]
>
> proc.time()
user system elapsed
80.790 7.773 91.200
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 3.170 | 0.744 | 4.135 | |
| MsBackendRawFileReader | 6.361 | 2.098 | 9.139 | |
| hidden_aliases | 2.036 | 0.699 | 3.005 | |
| ioBenchmark | 32.515 | 6.162 | 11.760 | |