Back to Build/check report for BioC 3.22 experimental data
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2025-11-18 15:41 -0500 (Tue, 18 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 4786
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 44/435HostnameOS / ArchINSTALLBUILDCHECK
bugphyzz 1.4.0  (landing page)
Samuel Gamboa
Snapshot Date: 2025-11-18 07:30 -0500 (Tue, 18 Nov 2025)
git_url: https://git.bioconductor.org/packages/bugphyzz
git_branch: RELEASE_3_22
git_last_commit: 1ab92d5
git_last_commit_date: 2025-10-29 10:06:34 -0500 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for bugphyzz on nebbiolo2

To the developers/maintainers of the bugphyzz package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: bugphyzz
Version: 1.4.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data bugphyzz
StartedAt: 2025-11-18 11:09:47 -0500 (Tue, 18 Nov 2025)
EndedAt: 2025-11-18 11:25:27 -0500 (Tue, 18 Nov 2025)
EllapsedTime: 939.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data bugphyzz
###
##############################################################################
##############################################################################


* checking for file ‘bugphyzz/DESCRIPTION’ ... OK
* preparing ‘bugphyzz’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘bugphyzz.Rmd’ using rmarkdown

Quitting from bugphyzz.Rmd:188-191 [import data]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `.util_download()`:
! bfcadd() failed; see warnings()
---
Backtrace:
    ▆
 1. └─bugphyzz::importBugphyzz()
 2.   └─bugphyzz:::.downloadResource(version, forceDownload)
 3.     └─bugphyzz:::.downloadZ(suffix, forceDownload)
 4.       └─bugphyzz:::.getResource(...)
 5.         ├─BiocFileCache::bfcadd(cache, rname, url)
 6.         └─BiocFileCache::bfcadd(cache, rname, url)
 7.           └─BiocFileCache:::.util_download(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'bugphyzz.Rmd' failed with diagnostics:
bfcadd() failed; see warnings()
--- failed re-building ‘bugphyzz.Rmd’

--- re-building ‘sources.Rmd’ using rmarkdown
--- finished re-building ‘sources.Rmd’

SUMMARY: processing the following file failed:
  ‘bugphyzz.Rmd’

Error: Vignette re-building failed.
Execution halted