Back to the "Multiple platform build/check report"

BioC experimental data: CHECK report for fucci on moscato2

This page was generated on 2016-04-02 19:22:43 -0700 (Sat, 02 Apr 2016).

Package 97/288HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fucci 0.99.4
Diana LOW
Snapshot Date: 2016-04-02 07:15:11 -0700 (Sat, 02 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/fucci
Last Changed Rev: 3688 / Revision: 3695
Last Changed Date: 2016-03-29 12:55:50 -0700 (Tue, 29 Mar 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK [ OK ] OK 

Summary

Package: fucci
Version: 0.99.4
Command: rm -rf fucci.buildbin-libdir fucci.Rcheck && mkdir fucci.buildbin-libdir fucci.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=fucci.buildbin-libdir fucci_0.99.4.tar.gz >fucci.Rcheck\00install.out 2>&1 && cp fucci.Rcheck\00install.out fucci-install.out && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=fucci.buildbin-libdir --install="check:fucci-install.out" --force-multiarch --no-vignettes --timings fucci_0.99.4.tar.gz
StartedAt: 2016-04-02 11:42:57 -0700 (Sat, 02 Apr 2016)
EndedAt: 2016-04-02 11:44:16 -0700 (Sat, 02 Apr 2016)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:  OK  
CheckDir: fucci.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf fucci.buildbin-libdir fucci.Rcheck && mkdir fucci.buildbin-libdir fucci.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=fucci.buildbin-libdir fucci_0.99.4.tar.gz >fucci.Rcheck\00install.out 2>&1 && cp fucci.Rcheck\00install.out fucci-install.out  && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=fucci.buildbin-libdir --install="check:fucci-install.out" --force-multiarch --no-vignettes --timings fucci_0.99.4.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'E:/biocbld/bbs-3.3-data-experiment/meat/fucci.Rcheck'
* using R version 3.3.0 alpha (2016-03-28 r70390)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'fucci/DESCRIPTION' ... OK
* this is package 'fucci' version '0.99.4'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'fucci' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 36.0Mb
  sub-directories of 1Mb or more:
    extdata  36.0Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [0s] OK
** running examples for arch 'x64' ... [0s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'E:/biocbld/bbs-3.3-data-experiment/meat/fucci.Rcheck/00check.log'
for details.


fucci.Rcheck/00install.out:


install for i386

* installing *source* package 'fucci' ...
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'fucci' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fucci' as fucci_0.99.4.zip
* DONE (fucci)

fucci.Rcheck/examples_i386/fucci-Ex.timings:

nameusersystemelapsed
fucci0.030.000.03

fucci.Rcheck/examples_x64/fucci-Ex.timings:

nameusersystemelapsed
fucci0.030.000.03