yeastRNASeq 0.11.0 J. Bullard
Snapshot Date: 2016-05-28 09:20:19 -0700 (Sat, 28 May 2016) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/yeastRNASeq | Last Changed Rev: 3763 / Revision: 3781 | Last Changed Date: 2016-05-03 14:48:02 -0700 (Tue, 03 May 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | WARNINGS | | ![UNNEEDED, same version exists in internal repository UNNEEDED, same version exists in internal repository](../120px-Blue_Light_Icon.svg.png) |
moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK | |
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### Running command:
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### rm -rf yeastRNASeq.buildbin-libdir yeastRNASeq.Rcheck && mkdir yeastRNASeq.buildbin-libdir yeastRNASeq.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=yeastRNASeq.buildbin-libdir yeastRNASeq_0.11.0.tar.gz >yeastRNASeq.Rcheck\00install.out 2>&1 && cp yeastRNASeq.Rcheck\00install.out yeastRNASeq-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=yeastRNASeq.buildbin-libdir --install="check:yeastRNASeq-install.out" --force-multiarch --no-vignettes --timings yeastRNASeq_0.11.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/yeastRNASeq.Rcheck'
* using R version 3.3.0 (2016-05-03)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'yeastRNASeq/DESCRIPTION' ... OK
* this is package 'yeastRNASeq' version '0.11.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'yeastRNASeq' can be installed ... OK
* checking installed package size ... NOTE
installed size is 313.7Mb
sub-directories of 1Mb or more:
data 62.7Mb
reads 250.8Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
geneLevelData.rda 68Kb 43Kb bzip2
yeastAligned.rda 62.6Mb 44.4Mb xz
yeastAnno.rda 80Kb 57Kb xz
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
'D:/biocbld/bbs-3.4-data-experiment/meat/yeastRNASeq.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'yeastRNASeq' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'yeastRNASeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'yeastRNASeq' as yeastRNASeq_0.11.0.zip
* DONE (yeastRNASeq)