BioC 3.6: BUILD BIN report for AMOUNTAIN on veracruz1

Package: AMOUNTAIN

Version: 1.3.0

Command: rm -rf AMOUNTAIN.buildbin-libdir && mkdir AMOUNTAIN.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh AMOUNTAIN_1.3.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R AMOUNTAIN.buildbin-libdir

StartedAt: 2017-08-16 09:50:09 -0400 (Wed, 16 Aug 2017)

EndedAt: 2017-08-16 09:50:25 -0400 (Wed, 16 Aug 2017)

EllapsedTime: 16.5 seconds

RetCode: 0

Status:  OK

PackageFile: AMOUNTAIN_1.3.0.tgz

PackageFileSize: 609.6 KiB

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf AMOUNTAIN.buildbin-libdir && mkdir AMOUNTAIN.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh AMOUNTAIN_1.3.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R AMOUNTAIN.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=AMOUNTAIN.buildbin-libdir AMOUNTAIN_1.3.0.tar.gz'
>>>>>>> 

* installing *source* package ‘AMOUNTAIN’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include  `gsl-config --cflags` -DR_DIRICHLETMULTINOMIAL -fPIC  -Wall -g -O2  -c AMOUNTAIN.c -o AMOUNTAIN.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o AMOUNTAIN.so AMOUNTAIN.o -L/usr/local/lib -lgsl -lgslcblas -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.6-bioc/meat/AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (AMOUNTAIN)


>>>>>>> 
>>>>>>> FIXING LINKS FOR AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "AMOUNTAIN.buildbin-libdir/AMOUNTAIN/libs//AMOUNTAIN.so"