Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:33:24 -0400 (Thu, 12 Apr 2018).
Package 223/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
ChIPseqR 1.32.0 Peter Humburg
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | WARNINGS | ![]() | ||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | WARNINGS | OK | ![]() | ||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | WARNINGS | [ OK ] | ![]() |
Package: ChIPseqR |
Version: 1.32.0 |
Command: rm -rf ChIPseqR.buildbin-libdir && mkdir ChIPseqR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChIPseqR_1.32.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChIPseqR.buildbin-libdir |
StartedAt: 2018-04-12 11:14:36 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 11:15:08 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 31.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: ChIPseqR_1.32.0.tgz |
PackageFileSize: 565.3 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf ChIPseqR.buildbin-libdir && mkdir ChIPseqR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChIPseqR_1.32.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChIPseqR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ChIPseqR.buildbin-libdir ChIPseqR_1.32.0.tar.gz' >>>>>>> * installing *source* package ‘ChIPseqR’ ... ** libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c startScore.c -o startScore.o startScore.c:66:15: warning: unused variable 'tmp_stat' [-Wunused-variable] double stat, tmp_stat; ^ 1 warning generated. clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ChIPseqR.so startScore.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.6-bioc/meat/ChIPseqR.buildbin-libdir/ChIPseqR/libs ** R ** inst ** preparing package for lazy loading Warning: replacing previous import ‘BiocGenerics::image’ by ‘graphics::image’ when loading ‘ChIPseqR’ Warning: replacing previous import ‘S4Vectors::head’ by ‘utils::head’ when loading ‘ChIPseqR’ Warning: replacing previous import ‘S4Vectors::tail’ by ‘utils::tail’ when loading ‘ChIPseqR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded Warning: replacing previous import ‘BiocGenerics::image’ by ‘graphics::image’ when loading ‘ChIPseqR’ Warning: replacing previous import ‘S4Vectors::head’ by ‘utils::head’ when loading ‘ChIPseqR’ Warning: replacing previous import ‘S4Vectors::tail’ by ‘utils::tail’ when loading ‘ChIPseqR’ * DONE (ChIPseqR) >>>>>>> >>>>>>> FIXING LINKS FOR ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "ChIPseqR.buildbin-libdir/ChIPseqR/libs//ChIPseqR.so"