Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:25:30 -0400 (Thu, 12 Apr 2018).
Package 492/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
FlowSOM 1.10.0 Sofie Van Gassen
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | ![]() | ||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() |
Package: FlowSOM |
Version: 1.10.0 |
Command: rm -rf FlowSOM.buildbin-libdir && mkdir FlowSOM.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/FlowSOM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=FlowSOM.buildbin-libdir --merge-multiarch FlowSOM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL FlowSOM_1.10.0.zip && rm FlowSOM_1.10.0.tar.gz FlowSOM_1.10.0.zip |
StartedAt: 2018-04-11 18:32:03 -0400 (Wed, 11 Apr 2018) |
EndedAt: 2018-04-11 18:33:11 -0400 (Wed, 11 Apr 2018) |
EllapsedTime: 67.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf FlowSOM.buildbin-libdir && mkdir FlowSOM.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/FlowSOM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=FlowSOM.buildbin-libdir --merge-multiarch FlowSOM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL FlowSOM_1.10.0.zip && rm FlowSOM_1.10.0.tar.gz FlowSOM_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1138k 100 1138k 0 0 34.1M 0 --:--:-- --:--:-- --:--:-- 38.3M install for i386 * installing *source* package 'FlowSOM' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O3 -Wall -std=gnu99 -mtune=generic -c som.c -o som.o C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o FlowSOM.dll tmp.def som.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/FlowSOM.buildbin-libdir/FlowSOM/libs/i386 ** R ** inst ** preparing package for lazy loading ** help *** installing help indices converting help for package 'FlowSOM' finding HTML links ... done AddFlowFrame html AggregateFlowFrames html BuildMST html BuildSOM html CountGroups html Dist.MST html FMeasure html FlowSOM html FlowSOMSubset html Initialize html MapDataToCodes html MetaClustering html NewData html PlotCenters html PlotClusters2D html PlotGroups html PlotMarker html PlotNode html PlotNumbers html PlotPies html PlotStars html PlotVariable html ProcessGatingML html finding level-2 HTML links ... done Purity html QueryStarPlot html ReadInput html SOM html SaveClustersToFCS html UpdateNodeSize html computeBackgroundColor html metaClustering_consensus html plotStarLegend html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'FlowSOM' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -O2 -Wall -std=gnu99 -mtune=generic -c som.c -o som.o C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o FlowSOM.dll tmp.def som.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/FlowSOM.buildbin-libdir/FlowSOM/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'FlowSOM' as FlowSOM_1.10.0.zip * DONE (FlowSOM) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library' package 'FlowSOM' successfully unpacked and MD5 sums checked In R CMD INSTALL