Jobst Landgrebe
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/daMA |
| Branch: RELEASE_3_6 |
| Last Commit: 5a895cc |
| Last Changed Date: 2017-10-30 12:38:39 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:06:59 -0400 (Thu, 12 Apr 2018).
| Package 328/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| daMA 1.50.0 Jobst Landgrebe
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | [ OK ] | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: daMA |
| Version: 1.50.0 |
| Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings daMA_1.50.0.tar.gz |
| StartedAt: 2018-04-11 22:42:46 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 22:43:04 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 18.0 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: daMA.Rcheck |
| Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings daMA_1.50.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.6-bioc/meat/daMA.Rcheck’ * using R version 3.4.4 (2018-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘daMA/DESCRIPTION’ ... OK * this is package ‘daMA’ version ‘1.50.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘daMA’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE prepare_Rd: analyseMA.Rd:70: Dropping empty section \note prepare_Rd: analyseMA.Rd:72: Dropping empty section \seealso prepare_Rd: cmat.Rd:13-14: Dropping empty section \format prepare_Rd: cmat.Rd:15-16: Dropping empty section \details prepare_Rd: cmat.Rd:17-19: Dropping empty section \source prepare_Rd: cmatB.AB.Rd:13-14: Dropping empty section \format prepare_Rd: cmatB.AB.Rd:15-16: Dropping empty section \details prepare_Rd: cmatB.AB.Rd:17-18: Dropping empty section \source prepare_Rd: core.Rd:42: Dropping empty section \keyword prepare_Rd: core.Rd:29-30: Dropping empty section \details prepare_Rd: core.Rd:31-32: Dropping empty section \value prepare_Rd: core.Rd:38: Dropping empty section \note prepare_Rd: core.Rd:40: Dropping empty section \seealso prepare_Rd: core.Rd:41: Dropping empty section \examples prepare_Rd: data.3x2.Rd:15-16: Dropping empty section \details prepare_Rd: data.3x2.Rd:21-22: Dropping empty section \references prepare_Rd: designMA.Rd:66: Dropping empty section \note prepare_Rd: designMA.Rd:68: Dropping empty section \seealso prepare_Rd: id.3x2.Rd:14-15: Dropping empty section \details prepare_Rd: id.3x2.Rd:16-17: Dropping empty section \source prepare_Rd: id.3x2.Rd:18-19: Dropping empty section \references * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.6-bioc/meat/daMA.Rcheck/00check.log’ for details.
daMA.Rcheck/00install.out
* installing *source* package ‘daMA’ ... ** R ** data ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (daMA)
daMA.Rcheck/daMA-Ex.timings
| name | user | system | elapsed | |
| analyseMA | 0.004 | 0.000 | 0.000 | |
| cinfo | 0.008 | 0.004 | 0.013 | |
| cinfoB.AB | 0.000 | 0.000 | 0.001 | |
| cmat | 0.004 | 0.000 | 0.001 | |
| cmatB.AB | 0.000 | 0.000 | 0.001 | |
| data.3x2 | 0.092 | 0.000 | 0.092 | |
| designMA | 0.004 | 0.000 | 0.000 | |
| designs.composite | 0.000 | 0.000 | 0.002 | |
| id.3x2 | 0.004 | 0.000 | 0.002 | |