Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:35:06 -0400 (Thu, 12 Apr 2018).
Package 443/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
exomeCopy 1.24.0 Michael Love
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | ![]() | ||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | ![]() |
Package: exomeCopy |
Version: 1.24.0 |
Command: rm -rf exomeCopy.buildbin-libdir && mkdir exomeCopy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh exomeCopy_1.24.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R exomeCopy.buildbin-libdir |
StartedAt: 2018-04-12 11:26:58 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 11:27:07 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 9.2 seconds |
RetCode: 0 |
Status: OK |
PackageFile: exomeCopy_1.24.0.tgz |
PackageFileSize: 500.4 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf exomeCopy.buildbin-libdir && mkdir exomeCopy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh exomeCopy_1.24.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R exomeCopy.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=exomeCopy.buildbin-libdir exomeCopy_1.24.0.tar.gz' >>>>>>> * installing *source* package ‘exomeCopy’ ... ** libs clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c exomeCopy.c -o exomeCopy.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o exomeCopy.so exomeCopy.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.6-bioc/meat/exomeCopy.buildbin-libdir/exomeCopy/libs ** R ** data ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (exomeCopy) >>>>>>> >>>>>>> FIXING LINKS FOR exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgcc_s.1.dylib" "exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libgfortran.3.dylib" "exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.5.2.dylib" "exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libreadline.dylib" "exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libquadmath.0.dylib" "exomeCopy.buildbin-libdir/exomeCopy/libs//exomeCopy.so"