Back to Multiple platform build/check report for BioC 3.6 |
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This page was generated on 2018-04-12 13:24:18 -0400 (Thu, 12 Apr 2018).
Package 883/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
monocle 2.6.4 Cole Trapnell
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | ![]() | ||||||
veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() |
Package: monocle |
Version: 2.6.4 |
Command: cd monocle.buildbin-libdir/monocle && zip -r ../../monocle_2.6.4.zip . & cd ../.. |
StartedAt: 2018-04-12 04:52:21 -0400 (Thu, 12 Apr 2018) |
EndedAt: 2018-04-12 04:52:57 -0400 (Thu, 12 Apr 2018) |
EllapsedTime: 36.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: monocle_2.6.4.zip |
PackageFileSize: 3.316 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd monocle.buildbin-libdir/monocle && zip -r ../../monocle_2.6.4.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 76%) adding: data/ (372 bytes security) (stored 0%) adding: data/Rdata.rdb (332 bytes security) (stored 0%) adding: data/Rdata.rds (332 bytes security) (stored 0%) adding: data/Rdata.rdx (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 47%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 57%) adding: doc/monocle-vignette.pdf (332 bytes security) (deflated 13%) adding: doc/monocle-vignette.R (332 bytes security) (deflated 49%) adding: doc/monocle-vignette.Rnw (332 bytes security) (deflated 53%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/lung_exprs_data.RData (332 bytes security) (deflated 0%) adding: extdata/lung_feature_data.RData (332 bytes security) (deflated 5%) adding: extdata/lung_phenotype_data.RData (332 bytes security) (deflated 9%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 72%) adding: help/monocle.rdb (332 bytes security) (deflated 3%) adding: help/monocle.rdx (332 bytes security) (deflated 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 78%) adding: html/addCellType.html (332 bytes security) (deflated 52%) adding: html/BEAM.html (332 bytes security) (deflated 60%) adding: html/branchTest.html (332 bytes security) (deflated 60%) adding: html/buildBranchCellDataSet.html (332 bytes security) (deflated 57%) adding: html/calABCs.html (332 bytes security) (deflated 62%) adding: html/calibrate_per_cell_total_proposal.html (332 bytes security) (deflated 55%) adding: html/calILRs.html (332 bytes security) (deflated 64%) adding: html/CellDataSet-methods.html (332 bytes security) (deflated 61%) adding: html/CellDataSet.html (332 bytes security) (deflated 60%) adding: html/cellPairwiseDistances-set.html (332 bytes security) (deflated 55%) adding: html/cellPairwiseDistances.html (332 bytes security) (deflated 49%) adding: html/CellType.html (332 bytes security) (deflated 46%) adding: html/CellTypeHierarchy.html (332 bytes security) (deflated 47%) adding: html/clusterCells.html (332 bytes security) (deflated 63%) adding: html/clusterGenes.html (332 bytes security) (deflated 52%) adding: html/compareModels.html (332 bytes security) (deflated 51%) adding: html/detectBifurcationPoint.html (332 bytes security) (deflated 65%) adding: html/detectGenes.html (332 bytes security) (deflated 50%) adding: html/differentialGeneTest.html (332 bytes security) (deflated 59%) adding: html/diff_test_helper.html (332 bytes security) (deflated 62%) adding: html/dispersionTable.html (332 bytes security) (deflated 47%) adding: html/estimateDispersionsForCellDataSet.html (332 bytes security) (deflated 57%) adding: html/estimateSizeFactorsForMatrix.html (332 bytes security) (deflated 56%) adding: html/estimate_t.html (332 bytes security) (deflated 55%) adding: html/exportCDS.html (332 bytes security) (deflated 56%) adding: html/extract_good_branched_ordering.html (332 bytes security) (deflated 57%) adding: html/fitModel.html (332 bytes security) (deflated 60%) adding: html/fit_model_helper.html (332 bytes security) (deflated 58%) adding: html/genSmoothCurveResiduals.html (332 bytes security) (deflated 55%) adding: html/genSmoothCurves.html (332 bytes security) (deflated 56%) adding: html/get_classic_muscle_markers.html (332 bytes security) (deflated 45%) adding: html/importCDS.html (332 bytes security) (deflated 57%) adding: html/load_HSMM.html (332 bytes security) (deflated 44%) adding: html/load_HSMM_markers.html (332 bytes security) (deflated 46%) adding: html/load_lung.html (332 bytes security) (deflated 46%) adding: html/markerDiffTable.html (332 bytes security) (deflated 61%) adding: html/mcesApply.html (332 bytes security) (deflated 55%) adding: html/minSpanningTree-set.html (332 bytes security) (deflated 52%) adding: html/minSpanningTree.html (332 bytes security) (deflated 48%) adding: html/newCellDataSet.html (332 bytes security) (deflated 59%) adding: html/newCellTypeHierarchy.html (332 bytes security) (deflated 65%) adding: html/orderCells.html (332 bytes security) (deflated 58%) adding: html/order_p_node.html (332 bytes security) (deflated 50%) adding: html/package-deprecated.html (332 bytes security) (deflated 63%) adding: html/plot_cell_clusters.html (332 bytes security) (deflated 60%) adding: html/plot_cell_trajectory.html (332 bytes security) (deflated 66%) adding: html/plot_clusters.html (332 bytes security) (deflated 57%) adding: html/plot_coexpression_matrix.html (332 bytes security) (deflated 62%) adding: html/plot_complex_cell_trajectory.html (332 bytes security) (deflated 65%) adding: html/plot_genes_branched_heatmap.html (332 bytes security) (deflated 69%) adding: html/plot_genes_branched_pseudotime.html (332 bytes security) (deflated 63%) adding: html/plot_genes_in_pseudotime.html (332 bytes security) (deflated 62%) adding: html/plot_genes_jitter.html (332 bytes security) (deflated 61%) adding: html/plot_genes_positive_cells.html (332 bytes security) (deflated 60%) adding: html/plot_genes_violin.html (332 bytes security) (deflated 61%) adding: html/plot_multiple_branches_heatmap.html (332 bytes security) (deflated 67%) adding: html/plot_multiple_branches_pseudotime.html (332 bytes security) (deflated 63%) adding: html/plot_ordering_genes.html (332 bytes security) (deflated 45%) adding: html/plot_pc_variance_explained.html (332 bytes security) (deflated 62%) adding: html/plot_pseudotime_heatmap.html (332 bytes security) (deflated 65%) adding: html/plot_rho_delta.html (332 bytes security) (deflated 54%) adding: html/pq_helper.html (332 bytes security) (deflated 51%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/reducedDimA-set.html (332 bytes security) (deflated 50%) adding: html/reducedDimA.html (332 bytes security) (deflated 48%) adding: html/reducedDimK-set.html (332 bytes security) (deflated 51%) adding: html/reducedDimK.html (332 bytes security) (deflated 48%) adding: html/reducedDimS-set.html (332 bytes security) (deflated 51%) adding: html/reducedDimS.html (332 bytes security) (deflated 47%) adding: html/reducedDimW-set.html (332 bytes security) (deflated 53%) adding: html/reducedDimW.html (332 bytes security) (deflated 48%) adding: html/reduceDimension.html (332 bytes security) (deflated 60%) adding: html/relative2abs.html (332 bytes security) (deflated 63%) adding: html/residualMatrix.html (332 bytes security) (deflated 50%) adding: html/responseMatrix.html (332 bytes security) (deflated 52%) adding: html/selectNegentropyGenes.html (332 bytes security) (deflated 59%) adding: html/selectTopMarkers.html (332 bytes security) (deflated 50%) adding: html/setOrderingFilter.html (332 bytes security) (deflated 49%) adding: html/spike_df.html (332 bytes security) (deflated 53%) adding: html/vstExprs.html (332 bytes security) (deflated 52%) adding: INDEX (332 bytes security) (deflated 72%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/monocle.dll (332 bytes security) (deflated 65%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/monocle.dll (332 bytes security) (deflated 67%) adding: MD5 (332 bytes security) (deflated 51%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 1%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 71%) adding: NEWS (332 bytes security) (deflated 59%) adding: R/ (372 bytes security) (stored 0%) adding: R/monocle (332 bytes security) (deflated 41%) adding: R/monocle.rdb (332 bytes security) (deflated 6%) adding: R/monocle.rdx (332 bytes security) (stored 0%) adding: tests/ (372 bytes security) (stored 0%) adding: tests/basic_tests.R (332 bytes security) (deflated 60%) adding: tests/test.addCellType.R (332 bytes security) (deflated 63%) adding: tests/test.calculateMarkerSpecificity.R (332 bytes security) (deflated 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tests/test.plot_ordering_genes.R (332 bytes security) (deflated 66%) adding: tests/test.plot_pc_variance_explained.R (332 bytes security) (deflated 65%) adding: tests/test.reduceDimension.R (332 bytes security) (deflated 52%) adding: tests/test.relative2abs.R (332 bytes security) (deflated 71%) adding: tests/test.setOrderingFilter.R (332 bytes security) (deflated 67%)