BioC experimental data: CHECK report for HIVcDNAvantWout03 on malbec1

Package: HIVcDNAvantWout03

Version: 1.17.0

Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings HIVcDNAvantWout03_1.17.0.tar.gz

StartedAt: 2017-08-15 10:51:01 -0400 (Tue, 15 Aug 2017)

EndedAt: 2017-08-15 10:51:12 -0400 (Tue, 15 Aug 2017)

EllapsedTime: 11.4 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: HIVcDNAvantWout03.Rcheck

Warnings: 2

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### Running command:
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###   /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD check --no-vignettes --timings HIVcDNAvantWout03_1.17.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.6-data-experiment/meat/HIVcDNAvantWout03.Rcheck’
* using R version 3.4.1 (2017-06-30)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘HIVcDNAvantWout03/DESCRIPTION’ ... OK
* this is package ‘HIVcDNAvantWout03’ version ‘1.17.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HIVcDNAvantWout03’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    data   5.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Subdirectory ‘inst’ contains no files.
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
  ‘hivData.pdf’
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 2 WARNINGs, 1 NOTE
See
  ‘/home/biocbuild/bbs-3.6-data-experiment/meat/HIVcDNAvantWout03.Rcheck/00check.log’
for details.

* installing *source* package ‘HIVcDNAvantWout03’ ...
** data
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (HIVcDNAvantWout03)