David Coffey
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/LymphoSeq |
| Branch: RELEASE_3_7 |
| Last Commit: ec13d7a |
| Last Changed Date: 2018-04-30 10:35:41 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:42:11 -0400 (Wed, 17 Oct 2018).
| Package 808/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| LymphoSeq 1.8.0 David Coffey
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: LymphoSeq |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/LymphoSeq_1.8.0.tar.gz && rm -rf LymphoSeq.buildbin-libdir && mkdir LymphoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LymphoSeq.buildbin-libdir LymphoSeq_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL LymphoSeq_1.8.0.zip && rm LymphoSeq_1.8.0.tar.gz LymphoSeq_1.8.0.zip |
| StartedAt: 2018-10-16 19:40:15 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 19:41:40 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 84.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/LymphoSeq_1.8.0.tar.gz && rm -rf LymphoSeq.buildbin-libdir && mkdir LymphoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LymphoSeq.buildbin-libdir LymphoSeq_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL LymphoSeq_1.8.0.zip && rm LymphoSeq_1.8.0.tar.gz LymphoSeq_1.8.0.zip
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install for i386
* installing *source* package 'LymphoSeq' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'LymphoSeq'
finding HTML links ... done
alignSeq html
bhattacharyyaCoefficient html
bhattacharyyaMatrix html
chordDiagramVDJ html
clonalRelatedness html
clonality html
cloneTrack html
commonSeqs html
commonSeqsBar html
commonSeqsPlot html
commonSeqsVenn html
differentialAbundance html
exportFasta html
geneFreq html
lorenzCurve html
mergeFiles html
pairwisePlot html
phyloTree html
productive html
productiveSeq html
readImmunoSeq html
removeSeq html
searchPublished html
searchSeq html
seqMatrix html
similarityMatrix html
similarityScore html
topFreq html
topSeqs html
topSeqsPlot html
uniqueSeqs html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'LymphoSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LymphoSeq' as LymphoSeq_1.8.0.zip
* DONE (LymphoSeq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'LymphoSeq' successfully unpacked and MD5 sums checked
In R CMD INSTALL