Multiple platform build/check report for BioC 3.23 - BUILD results for EventPointer on kjohnson3

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"	4874
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"	4582
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for EventPointer on kjohnson3

To the developers/maintainers of the EventPointer package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EventPointer.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: EventPointer

Version: 3.19.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EventPointer

StartedAt: 2025-12-12 16:19:00 -0500 (Fri, 12 Dec 2025)

EndedAt: 2025-12-12 16:19:31 -0500 (Fri, 12 Dec 2025)

EllapsedTime: 30.3 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EventPointer
###
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* checking for file ‘EventPointer/DESCRIPTION’ ... OK
* preparing ‘EventPointer’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/EventPointerStats_BAM.Rd:41: unknown macro '\Psi'
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/EventPointerStats_BAM.Rd:42: unknown macro '\Delta'
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/EventPointerStats_BAM.Rd:42: unknown macro '\Psi'
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/EventsDetection_BAM.Rd:62: unknown macro '\Psi'
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/EventsDetection_ST.Rd:46: unknown macro '\Psi'
Warning: /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpXUnoAh/Rbuildcd2713fe012c/EventPointer/man/PrepareBam_EP.Rd:55: unknown macro '\Psi'
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘EventPointer.Rmd’ using rmarkdown

Quitting from EventPointer.Rmd:520-526 [EventDetection]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `EventDetection()`:
! unused argument (Path = TxtPath)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'EventPointer.Rmd' failed with diagnostics:
unused argument (Path = TxtPath)
--- failed re-building ‘EventPointer.Rmd’

SUMMARY: processing the following file failed:
  ‘EventPointer.Rmd’

Error: Vignette re-building failed.
Execution halted