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This page was generated on 2025-10-27 12:45 -0400 (Mon, 27 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1683/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QSutils 1.27.0  (landing page)
Mercedes Guerrero-Murillo
Snapshot Date: 2025-10-26 13:45 -0400 (Sun, 26 Oct 2025)
git_url: https://git.bioconductor.org/packages/QSutils
git_branch: devel
git_last_commit: 3f8569c
git_last_commit_date: 2025-04-15 11:38:25 -0400 (Tue, 15 Apr 2025)
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for QSutils on kjohnson3

To the developers/maintainers of the QSutils package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/QSutils.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: QSutils
Version: 1.27.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data QSutils
StartedAt: 2025-10-26 17:36:57 -0400 (Sun, 26 Oct 2025)
EndedAt: 2025-10-26 17:48:25 -0400 (Sun, 26 Oct 2025)
EllapsedTime: 688.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data QSutils
###
##############################################################################
##############################################################################


* checking for file ‘QSutils/DESCRIPTION’ ... OK
* preparing ‘QSutils’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building ‘QSUtils-Alignment.Rmd’ using rmarkdown

Quitting from QSUtils-Alignment.Rmd:51-58 [installation]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
---
Backtrace:
    ▆
 1. └─BiocManager::install("QSutils")
 2.   └─BiocManager:::.version_validate(version)
 3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
 4.     └─BiocManager:::.stop(txt)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'QSUtils-Alignment.Rmd' failed with diagnostics:
Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
--- failed re-building ‘QSUtils-Alignment.Rmd’

--- re-building ‘QSutils-Diversity.Rmd’ using rmarkdown

Quitting from QSutils-Diversity.Rmd:55-58 [install]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
---
Backtrace:
    ▆
 1. └─BiocManager::install("QSutils")
 2.   └─BiocManager:::.version_validate(version)
 3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
 4.     └─BiocManager:::.stop(txt)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'QSutils-Diversity.Rmd' failed with diagnostics:
Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
--- failed re-building ‘QSutils-Diversity.Rmd’

--- re-building ‘QSutils-Simulation.Rmd’ using rmarkdown

Quitting from QSutils-Simulation.Rmd:65-68 [install]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
---
Backtrace:
    ▆
 1. └─BiocManager::install("QSutils")
 2.   └─BiocManager:::.version_validate(version)
 3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
 4.     └─BiocManager:::.stop(txt)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'QSutils-Simulation.Rmd' failed with diagnostics:
Bioconductor version cannot be validated; no internet connection?  See
  #troubleshooting section in vignette
--- failed re-building ‘QSutils-Simulation.Rmd’

SUMMARY: processing the following files failed:
  ‘QSUtils-Alignment.Rmd’ ‘QSutils-Diversity.Rmd’
  ‘QSutils-Simulation.Rmd’

Error: Vignette re-building failed.
Execution halted