Multiple platform build/check report for BioC 3.23 - CHECK results for graper on lconway

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"	4865
lconway	macOS 12.7.6 Monterey	x86_64	R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences"	4614
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"	4571
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on lconway

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.27.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz

StartedAt: 2025-11-26 21:33:15 -0500 (Wed, 26 Nov 2025)

EndedAt: 2025-11-26 21:34:37 -0500 (Wed, 26 Nov 2025)

EllapsedTime: 81.4 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-10-21 r88958)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.093
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.224
ELB improved by 268.869

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-538.601
ELB improved by 58.6226

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.221
ELB improved by 42.3801

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.756
ELB improved by 21.4653

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.143
ELB improved by 10.6126

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.646
ELB improved by 7.49711

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.084
ELB improved by 6.56224

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.295
ELB improved by 5.78864

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.581
ELB improved by 4.71443

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.002
ELB improved by 3.57822

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.306
ELB improved by 2.69597

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.202
ELB improved by 2.10481

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.511
ELB improved by 1.69049

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.135
ELB improved by 1.37609

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.023
ELB improved by 1.11251

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.15
ELB improved by 0.872444

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.482
ELB improved by 0.667762

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.966
ELB improved by 0.51595

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.556
ELB improved by 0.410201

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.221
ELB improved by 0.335311

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.941
ELB improved by 0.279828

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.704
ELB improved by 0.23695

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.501
ELB improved by 0.202852

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.326
ELB improved by 0.175317

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.173
ELB improved by 0.15292

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.038
ELB improved by 0.134621

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.919
ELB improved by 0.119596

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.812
ELB improved by 0.107175

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.715
ELB improved by 0.0968291

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.627
ELB improved by 0.0881464

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.546
ELB improved by 0.0808121

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.471
ELB improved by 0.0745851

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.402
ELB improved by 0.0692787

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.337
ELB improved by 0.064745

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.276
ELB improved by 0.0608642

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.219
ELB improved by 0.0575364

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.164
ELB improved by 0.0546766

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.112
ELB improved by 0.0522109

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.062
ELB improved by 0.0500743

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.014
ELB improved by 0.0482101

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.967
ELB improved by 0.0465693

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.922
ELB improved by 0.0451109

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.878
ELB improved by 0.0438017

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.836
ELB improved by 0.0426156

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.794
ELB improved by 0.0415327

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.753
ELB improved by 0.040538

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.714
ELB improved by 0.0396195

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.675
ELB improved by 0.0387676

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.637
ELB improved by 0.0379737

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.6
ELB improved by 0.0372301

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.563
ELB improved by 0.0365297

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.527
ELB improved by 0.0358659

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.492
ELB improved by 0.035233

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.458
ELB improved by 0.034626

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.424
ELB improved by 0.0340409

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.39
ELB improved by 0.0334745

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.357
ELB improved by 0.0329249

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.325
ELB improved by 0.0323909

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.293
ELB improved by 0.0318723

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.262
ELB improved by 0.0313697

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.231
ELB improved by 0.0308847

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.2
ELB improved by 0.0304195

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.17
ELB improved by 0.0299772

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.141
ELB improved by 0.0295616

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.112
ELB improved by 0.0291771

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.083
ELB improved by 0.0288291

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.054
ELB improved by 0.0285238

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.026
ELB improved by 0.0282685

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.998
ELB improved by 0.0280715

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.97
ELB improved by 0.0279429

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.942
ELB improved by 0.0278944

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.914
ELB improved by 0.0279402

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.886
ELB improved by 0.0280973

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.858
ELB improved by 0.0283863

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.829
ELB improved by 0.0288321

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.799
ELB improved by 0.0294644

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.769
ELB improved by 0.0303177

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.738
ELB improved by 0.0314307

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.705
ELB improved by 0.032843

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.67
ELB improved by 0.0345894

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.633
ELB improved by 0.0366897

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.594
ELB improved by 0.0391356

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.552
ELB improved by 0.0418792

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.508
ELB improved by 0.0448327

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.46
ELB improved by 0.047891

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.409
ELB improved by 0.0509755

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.355
ELB improved by 0.0540787

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.297
ELB improved by 0.0572764

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.237
ELB improved by 0.0606943

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.172
ELB improved by 0.064453

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.104
ELB improved by 0.0686291

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.03
ELB improved by 0.0732459

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.952
ELB improved by 0.0782825

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.868
ELB improved by 0.083686

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.779
ELB improved by 0.089376

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.684
ELB improved by 0.095244

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.583
ELB improved by 0.101149

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.476
ELB improved by 0.106912

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.363
ELB improved by 0.112319

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.246
ELB improved by 0.117121

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.125
ELB improved by 0.12105

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.001
ELB improved by 0.12383

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.876
ELB improved by 0.125212

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.751
ELB improved by 0.124992

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.628
ELB improved by 0.123051

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.509
ELB improved by 0.11937

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.395
ELB improved by 0.114046

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.287
ELB improved by 0.107283

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.188
ELB improved by 0.0993715

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.097
ELB improved by 0.0906599

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.016
ELB improved by 0.0815149

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.944
ELB improved by 0.0722892

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.88
ELB improved by 0.0632937

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.825
ELB improved by 0.0547813

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.779
ELB improved by 0.0469374

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.739
ELB improved by 0.0398805

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.705
ELB improved by 0.0336673

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.677
ELB improved by 0.0283022

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.653
ELB improved by 0.0237493

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.633
ELB improved by 0.0199447

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.616
ELB improved by 0.0168079

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.602
ELB improved by 0.0142516

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.59
ELB improved by 0.0121885

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.579
ELB improved by 0.0105369

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.57
ELB improved by 0.00922269

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.104
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.961
ELB improved by 302.143

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.333
ELB improved by 56.6278

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.329
ELB improved by 39.0033

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.303
ELB improved by 19.0262

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.293
ELB improved by 8.01028

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.391
ELB improved by 4.90229

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.13
ELB improved by 4.26069

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.809
ELB improved by 4.32058

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.273
ELB improved by 4.53646

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.805
ELB improved by 4.46761

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.934
ELB improved by 3.87154

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.003
ELB improved by 2.93112

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.945
ELB improved by 2.05786

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.492
ELB improved by 1.45236

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.435
ELB improved by 1.05775

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.645
ELB improved by 0.789676

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.033
ELB improved by 0.61243

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.53
ELB improved by 0.502333

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.094
ELB improved by 0.436515

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.696
ELB improved by 0.397399

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.323
ELB improved by 0.373627

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.964
ELB improved by 0.358342

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.617
ELB improved by 0.347414

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.279
ELB improved by 0.338311

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.949
ELB improved by 0.329485

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.629
ELB improved by 0.320063

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.319
ELB improved by 0.309661

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.021
ELB improved by 0.298251

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.735
ELB improved by 0.286037

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.462
ELB improved by 0.273341

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.201
ELB improved by 0.260509

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.953
ELB improved by 0.247843

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.718
ELB improved by 0.235569

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.494
ELB improved by 0.223825

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.281
ELB improved by 0.212666

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.079
ELB improved by 0.202086

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.887
ELB improved by 0.192032

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.705
ELB improved by 0.182425

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.532
ELB improved by 0.173172

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.367
ELB improved by 0.164183

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.212
ELB improved by 0.155381

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.065
ELB improved by 0.146706

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.927
ELB improved by 0.138127

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.798
ELB improved by 0.129638

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.676
ELB improved by 0.12126

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.563
ELB improved by 0.113028

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.458
ELB improved by 0.10499

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.361
ELB improved by 0.0971964

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.271
ELB improved by 0.0896944

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.189
ELB improved by 0.0825233

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.113
ELB improved by 0.0757132

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.044
ELB improved by 0.0692845

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.981
ELB improved by 0.0632488

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.923
ELB improved by 0.0576107

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.871
ELB improved by 0.0523692

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.823
ELB improved by 0.047519

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.78
ELB improved by 0.0430515

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.741
ELB improved by 0.0389553

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.706
ELB improved by 0.0352166

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.674
ELB improved by 0.0318194

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.645
ELB improved by 0.0287456

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.619
ELB improved by 0.0259756

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.596
ELB improved by 0.0234886

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.575
ELB improved by 0.0212629

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.555
ELB improved by 0.0192766

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.538
ELB improved by 0.0175079

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.522
ELB improved by 0.0159356

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.507
ELB improved by 0.0145396

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.494
ELB improved by 0.0133008

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.482
ELB improved by 0.0122016

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.471
ELB improved by 0.011226

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.46
ELB improved by 0.0103592

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.451
ELB improved by 0.00958829

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-852.032
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.276
ELB improved by 279.756

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.654
ELB improved by 61.622

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.143
ELB improved by 41.5113

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.209
ELB improved by 18.9335

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.77
ELB improved by 7.43913

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.098
ELB improved by 4.67233

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.75
ELB improved by 4.34777

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.177
ELB improved by 4.57296

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.198
ELB improved by 4.97906

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.89
ELB improved by 5.30784

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.665
ELB improved by 5.22547

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.165
ELB improved by 4.5002

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.854
ELB improved by 3.31062

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.72
ELB improved by 2.13367

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.425
ELB improved by 1.29576

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.615
ELB improved by 0.809711

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.065
ELB improved by 0.550353

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.654
ELB improved by 0.410106

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.325
ELB improved by 0.329243

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.046
ELB improved by 0.279353

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.798
ELB improved by 0.247341

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.572
ELB improved by 0.226636

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.359
ELB improved by 0.212952

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.156
ELB improved by 0.20256

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.964
ELB improved by 0.192391

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.783
ELB improved by 0.181296

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.612
ELB improved by 0.170469

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.45
ELB improved by 0.161895

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.294
ELB improved by 0.156656

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.139
ELB improved by 0.154696

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.983
ELB improved by 0.155441

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.825
ELB improved by 0.158302

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.662
ELB improved by 0.162852

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.494
ELB improved by 0.168841

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.317
ELB improved by 0.17615

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.133
ELB improved by 0.184757

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.938
ELB improved by 0.19472

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.732
ELB improved by 0.206159

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.512
ELB improved by 0.219259

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.278
ELB improved by 0.234274

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.027
ELB improved by 0.25154

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.755
ELB improved by 0.271488

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.46
ELB improved by 0.294654

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.139
ELB improved by 0.321679

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.786
ELB improved by 0.353243

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.396
ELB improved by 0.389908

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.964
ELB improved by 0.431784

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.486
ELB improved by 0.478018

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.96
ELB improved by 0.526328

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.386
ELB improved by 0.573163

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.772
ELB improved by 0.614717

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.125
ELB improved by 0.646919

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.463
ELB improved by 0.661303

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.819
ELB improved by 0.644125

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.228
ELB improved by 0.591672

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.71
ELB improved by 0.517222

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.275
ELB improved by 0.435404

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.92
ELB improved by 0.355467

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.636
ELB improved by 0.283403

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.414
ELB improved by 0.222242

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.241
ELB improved by 0.172507

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.108
ELB improved by 0.133385

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.005
ELB improved by 0.103412

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.924
ELB improved by 0.0808149

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.86
ELB improved by 0.0638443

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.809
ELB improved by 0.0510255

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.768
ELB improved by 0.0412381

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.734
ELB improved by 0.0336762

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.706
ELB improved by 0.0277697

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.683
ELB improved by 0.0231131

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.664
ELB improved by 0.0194124

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.647
ELB improved by 0.0164505

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.633
ELB improved by 0.0140641

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.621
ELB improved by 0.0121291

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.611
ELB improved by 0.0105503

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.601
ELB improved by 0.00925412

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.246
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.454
ELB improved by 283.792

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.231
ELB improved by 61.2223

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.577
ELB improved by 41.6546

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.304
ELB improved by 19.2723

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.092
ELB improved by 7.21278

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.646
ELB improved by 3.44525

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.024
ELB improved by 2.62201

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.554
ELB improved by 2.47005

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.053
ELB improved by 2.50116

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.45
ELB improved by 2.60308

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.737
ELB improved by 2.71268

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.989
ELB improved by 2.74804

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.371
ELB improved by 2.61869

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.071
ELB improved by 2.29988

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.19
ELB improved by 1.88052

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.701
ELB improved by 1.48885

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.521
ELB improved by 1.18037

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.581
ELB improved by 0.940267

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.827
ELB improved by 0.753553

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.209
ELB improved by 0.618104

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.682
ELB improved by 0.526983

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.215
ELB improved by 0.467436

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.787
ELB improved by 0.42771

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.387
ELB improved by 0.399792

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.008
ELB improved by 0.378882

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.646
ELB improved by 0.362268

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.297
ELB improved by 0.348508

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.961
ELB improved by 0.336976

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.633
ELB improved by 0.327616

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.312
ELB improved by 0.32082

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.995
ELB improved by 0.317439

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.676
ELB improved by 0.318956

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.348
ELB improved by 0.327884

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420
ELB improved by 0.348173

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.615
ELB improved by 0.38441

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.179
ELB improved by 0.436119

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.691
ELB improved by 0.487628

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.174
ELB improved by 0.517254

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.645
ELB improved by 0.529609

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.089
ELB improved by 0.555248

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.455
ELB improved by 0.634013

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.678
ELB improved by 0.777718

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.823
ELB improved by 0.855011

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.055
ELB improved by 0.767265

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.426
ELB improved by 0.629271

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.917
ELB improved by 0.508756

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.503
ELB improved by 0.413976

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.16
ELB improved by 0.343273

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.868
ELB improved by 0.292476

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.612
ELB improved by 0.255704

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.384
ELB improved by 0.227567

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.179
ELB improved by 0.205407

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.99
ELB improved by 0.189348

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.809
ELB improved by 0.180745

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.628
ELB improved by 0.181254

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.434
ELB improved by 0.193255

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.214
ELB improved by 0.22051

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.95
ELB improved by 0.264177

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.643
ELB improved by 0.306221

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.335
ELB improved by 0.308026

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.07
ELB improved by 0.265408

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.858
ELB improved by 0.211941

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.69
ELB improved by 0.167551

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.555
ELB improved by 0.135035

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.444
ELB improved by 0.111824

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.349
ELB improved by 0.0946675

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.268
ELB improved by 0.0810923

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.198
ELB improved by 0.0697146

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.138
ELB improved by 0.0599992

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.086
ELB improved by 0.0518215

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.041
ELB improved by 0.0450917

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.002
ELB improved by 0.0395877

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.967
ELB improved by 0.0349787

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.936
ELB improved by 0.0309334

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.909
ELB improved by 0.0272164

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.885
ELB improved by 0.0237285

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.864
ELB improved by 0.0204852

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.847
ELB improved by 0.0175582

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.832
ELB improved by 0.0150157

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.819
ELB improved by 0.0128869

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.808
ELB improved by 0.011157

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.798
ELB improved by 0.00977926

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.998   0.324   3.391

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.060	0.018	0.078
getPIPs	0.045	0.013	0.057
graper	0.093	0.020	0.115
makeExampleData	0.010	0.001	0.010
makeExampleDataWithUnequalGroups	0.010	0.001	0.011
plotELBO	0.332	0.023	0.357
plotGroupPenalties	1.334	0.042	1.386
plotPosterior	0.729	0.035	0.769
predict.graper	1.905	0.085	2.000
print.graper	0.045	0.011	0.056