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This page was generated on 2025-10-25 12:06 -0400 (Sat, 25 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4901
lconwaymacOS 12.7.6 Montereyx86_644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4691
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4658
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1512/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
onlineFDR 2.17.0  (landing page)
David S. Robertson
Snapshot Date: 2025-10-24 13:45 -0400 (Fri, 24 Oct 2025)
git_url: https://git.bioconductor.org/packages/onlineFDR
git_branch: devel
git_last_commit: 58794db
git_last_commit_date: 2025-04-15 11:34:32 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.6 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped
taishanLinux (openEuler 24.03 LTS) / aarch64  OK    NA    NA  

BUILD results for onlineFDR on kjohnson3

To the developers/maintainers of the onlineFDR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/onlineFDR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: onlineFDR
Version: 2.17.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data onlineFDR
StartedAt: 2025-10-24 17:16:13 -0400 (Fri, 24 Oct 2025)
EndedAt: 2025-10-24 17:16:27 -0400 (Fri, 24 Oct 2025)
EllapsedTime: 14.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data onlineFDR
###
##############################################################################
##############################################################################


* checking for file ‘onlineFDR/DESCRIPTION’ ... OK
* preparing ‘onlineFDR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘advanced-usage.Rmd’ using rmarkdown
--- finished re-building ‘advanced-usage.Rmd’

--- re-building ‘onlineFDR.Rmd’ using rmarkdown
2025-10-24 17:16:27.195 R[7155:541690309] XType: Using static font registry.

Quitting from onlineFDR.Rmd:233-252 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `LOND()`:
! The sum of the elements of betai must not be greater than alpha.
---
Backtrace:
    ▆
 1. └─onlineFDR::LOND(sample.df, alpha = 0.04, betai = bound)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'onlineFDR.Rmd' failed with diagnostics:
The sum of the elements of betai must not be greater than alpha.
--- failed re-building ‘onlineFDR.Rmd’

--- re-building ‘theory.Rmd’ using rmarkdown
--- finished re-building ‘theory.Rmd’

SUMMARY: processing the following file failed:
  ‘onlineFDR.Rmd’

Error: Vignette re-building failed.
Execution halted