Ben Bolstad
| Snapshot Date: 2026-03-09 13:40 -0400 (Mon, 09 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/preprocessCore |
| git_branch: devel |
| git_last_commit: bb678ea |
| git_last_commit_date: 2025-10-29 09:42:06 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-10 11:33 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4522 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1641/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| preprocessCore 1.73.0 (landing page) Ben Bolstad
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | OK | ERROR | ERROR | |||||||||
| See other builds for preprocessCore in R Universe. | ||||||||||||||
|
To the developers/maintainers of the preprocessCore package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/preprocessCore.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: preprocessCore |
| Version: 1.73.0 |
| Command: rm -rf preprocessCore.buildbin-libdir && mkdir preprocessCore.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh preprocessCore_1.73.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R preprocessCore.buildbin-libdir |
| StartedAt: 2026-03-09 16:44:20 -0400 (Mon, 09 Mar 2026) |
| EndedAt: 2026-03-09 16:44:23 -0400 (Mon, 09 Mar 2026) |
| EllapsedTime: 3.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf preprocessCore.buildbin-libdir && mkdir preprocessCore.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh preprocessCore_1.73.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R preprocessCore.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=preprocessCore.buildbin-libdir preprocessCore_1.73.0.tar.gz' >>>>>>> * installing *source* package ‘preprocessCore’ ... ** this is package ‘preprocessCore’ version ‘1.73.0’ ** using staged installation 'config' variable 'CPP' is defunct checking for gcc... clang -arch arm64 -std=gnu23 checking whether the C compiler works... no configure: error: in '/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/Rtmp49t2ed/R.INSTALLfbc52edf3c12/preprocessCore': configure: error: C compiler cannot create executables See 'config.log' for more details ERROR: configuration failed for package ‘preprocessCore’ * removing ‘/Users/biocbuild/bbs-3.23-bioc/meat/preprocessCore.buildbin-libdir/preprocessCore’