EBImage

Image processing and image analysis toolkit for R

The package provides functionality to perform image processing and image analysis in R. Originally designed to support automated image analysis in high throughput cell-based microscopy assays, the package is of general natuare and can be used for other image analysis problems. The package supports over 95 image formats through its interface to ImageMagick and provides an extensive set of functions for image manipulation and feature extraction on single images and image stacks. The package also features some GUI options providing a built-in image viewer and an image selection dialog.

Author Oleg Sklyar, Gregoire Pau, Mike Smith, Wolfgang Huber
Maintainer Gregoire Pau

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("EBImage")

Documentation

Package Downloads

Introduction to EBImage
an image processing and analysis toolkit for R
Reference Manual
Package source EBImage_2.6.0.tar.gz
Windows binary EBImage_2.6.0.zip
MacOS X 10.4 (Tiger) binary EBImage_2.6.0.tgz
MacOS X 10.5 (Leopard) binary EBImage_2.6.0.tgz
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Details

biocViews
Depends
R , methods , graphics , stats , utils
Imports
Suggests
System Requirements ImageMagick (>= 6.2.4), GTK+ (> 2.6) -- Windows dependencies are available from the URL below. See package vignette for installation instructions.
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Development History Bioconductor Changelog