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Package 201/208OSArchBUILDCHECKBUILD BIN

twilight

1.11.1

Stefanie Scheid		Linux (SUSE 9.2) x86_64 OK  OK 
Linux (SUSE 10.1) x86_64 OK  OK 
Linux (SUSE 9.2) i686[ OK ] OK 
Solaris 2.9 sparc OK  OK 
Windows Server 2003 x86_64 OK  OK  OK 
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 OK  OK 
Package: twilight
Version: 1.11.1
Command: /loc/biocbuild/2.0d/R/bin/R CMD build twilight
RetCode: 0
Time: 360.6 seconds
Status: OK
PackageFile: twilight_1.11.1.tar.gz

Command output

* checking for file 'twilight/DESCRIPTION' ... OK
* preparing 'twilight':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... OK
* installing the package to re-build vignettes
* Installing *source* package 'twilight' ...
** libs
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c confidence.line.c -o confidence.line.o
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c correlation.c -o correlation.o
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c kstest.c -o kstest.o
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c sep.c -o sep.o
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c twosample.perm.c -o twosample.perm.o
gcc -std=gnu99 -I/loc/biocbuild/2.0d/R/include -I/loc/biocbuild/2.0d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c twosample.single.c -o twosample.single.o
gcc -std=gnu99 -shared -L/usr/local/lib -o twilight.so confidence.line.o correlation.o kstest.o sep.o twosample.perm.o twosample.single.o   
** R
** data
** inst
** preparing package for lazy loading
Loading required package: splines
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

** help
 >>> Building/Updating help pages for package 'twilight'
     Formats: text html latex example 
  exfdr                             text    html    latex
  expval                            text    html    latex
  plot.twilight                     text    html    latex   example
  print.twilight                    text    html    latex   example
  twilight                          text    html    latex   example
  twilight.combi                    text    html    latex   example
  twilight.filtering                text    html    latex   example
  twilight.getlambda                text    html    latex
  twilight.getmatrix                text    html    latex
  twilight.permute.pair             text    html    latex
  twilight.permute.unpair           text    html    latex
  twilight.pval                     text    html    latex   example
  twilight.teststat                 text    html    latex   example
** building package indices ...
* DONE (twilight)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'twilight_1.11.1.tar.gz'