Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:45:47 -0400 (Wed, 17 Oct 2018).
Package 1357/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
sevenC 1.0.0 Jonas Ibn-Salem
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | ![]() | ||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() |
Package: sevenC |
Version: 1.0.0 |
Command: rm -rf sevenC.buildbin-libdir && mkdir sevenC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sevenC.buildbin-libdir sevenC_1.0.0.tar.gz |
StartedAt: 2018-10-17 06:59:19 -0400 (Wed, 17 Oct 2018) |
EndedAt: 2018-10-17 06:59:46 -0400 (Wed, 17 Oct 2018) |
EllapsedTime: 26.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: sevenC_1.0.0.zip |
PackageFileSize: 2.042 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf sevenC.buildbin-libdir && mkdir sevenC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sevenC.buildbin-libdir sevenC_1.0.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'sevenC' ... ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'sevenC' finding HTML links ... done TFspecificModels html addCor html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCor.Rd:10: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCor.Rd:23: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic addCovCor html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovCor.Rd:11: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovCor.Rd:34: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic addCovToGR html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:5: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:31: file link 'NumericList' in package 'IRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:33: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:36: file link 'NumericList' in package 'IRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:10: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:26: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addCovToGR.Rd:28: file link 'NumericList' in package 'IRanges' does not exist and so has been treated as a topic addInteractionSupport html finding level-2 HTML links ... done Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/addInteractionSupport.Rd:16: file link 'overlapsAny' in package 'IRanges' does not exist and so has been treated as a topic addMotifScore html addStrandCombination html cutoffBest10 html cutoffByTF html getCisPairs html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/getCisPairs.Rd:6: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/getCisPairs.Rd:11: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/getCisPairs.Rd:19: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic getOutOfBound html modelBest10Avg html motif.hg19.CTCF html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/motif.hg19.CTCF.Rd:7: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic motif.hg19.CTCF.chr22 html motif.hg19.CTCF.chr22.cov html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/motif.hg19.CTCF.chr22.cov.Rd:15: file link 'NumericList' in package 'IRanges' does not exist and so has been treated as a topic noZeroVar html parseLoopsRao html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/parseLoopsRao.Rd:6: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/parseLoopsRao.Rd:21: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/parseLoopsRao.Rd:14: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic parseLoopsTang html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/parseLoopsTang.Rd:13: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic predLogit html predLoops html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/predLoops.Rd:39: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/predLoops.Rd:11: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/predLoops.Rd:35: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic prepareCisPairs html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/prepareCisPairs.Rd:5: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/prepareCisPairs.Rd:25: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/prepareCisPairs.Rd:11: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQvFict/R.INSTALL133c9c86287/sevenC/man/prepareCisPairs.Rd:21: file link 'GInteractions' in package 'InteractionSet' does not exist and so has been treated as a topic sevenC html slideMean html ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'sevenC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'sevenC' as sevenC_1.0.0.zip * DONE (sevenC) In R CMD INSTALL In R CMD INSTALL